Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 MIR323A-201ENST00000362199 86 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 RNU4-40P-201ENST00000364351 143 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 RNU6-317P-201ENST00000384031 107 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AC087752.1-201ENST00000391360 558 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 PEX12P1-201ENST00000400284 1048 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 TMSB4XP8-201ENST00000402089 135 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 RN7SKP229-201ENST00000410465 302 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 U3.43-201ENST00000410734 213 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 TMSB4XP6-201ENST00000415187 135 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AL035660.1-201ENST00000422041 222 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 OR5M12P-201ENST00000423388 929 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 TMSB4XP1-201ENST00000424567 135 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 NANOGP4-201ENST00000427230 913 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 MTCO3P21-201ENST00000430791 643 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 EXTL2P1-201ENST00000446218 416 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 FTLP8-201ENST00000446770 267 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AC233982.1-201ENST00000451247 436 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 RN7SL193P-201ENST00000491708 276 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AC108471.1-201ENST00000513977 287 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 SNORA70.11-201ENST00000515987 138 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 SNORA70.13-201ENST00000516116 138 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 Y_RNA.710-201ENST00000516975 110 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 OSBPL9P5-201ENST00000542581 171 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AC079600.1-201ENST00000550326 297 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AL021368.3-201ENST00000607119 578 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AC055764.2-201ENST00000610089 670 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AC092106.3-201ENST00000611308 722 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AC126175.1-201ENST00000617041 758 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 MTCO1P11-201ENST00000429111 1528 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AC097063.1-201ENST00000426714 1797 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 AC022325.1-201ENST00000502748 2199 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 MRE11P1-201ENST00000464884 2127 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 AC104454.1-201ENST00000421341 1401 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 RNU6-1214P-201ENST00000363650 109 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 RN7SKP292-201ENST00000365522 317 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 SNORA51.12-201ENST00000384448 134 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 SNORA40.2-201ENST00000390847 128 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 AL590084.1-201ENST00000407885 387 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 MIR1303-201ENST00000408625 86 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 GAPDHP49-201ENST00000421421 961 ntBASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.86□□□□□ -1.47
PCDHGA3Q9Y5H0 RPL21P110-201ENST00000433345 446 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms