Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AL121932.1-201ENST00000605542 214 ntBASIC4.84□□□□□ -1.63
TREX1Q9NSU2 AC007497.1-201ENST00000610421 561 ntBASIC4.84□□□□□ -1.63
TREX1Q9NSU2 AP002799.1-201ENST00000623552 423 ntBASIC4.84□□□□□ -1.63
TREX1Q9NSU2 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.84□□□□□ -1.63
TREX1Q9NSU2 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.63
TREX1Q9NSU2 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TREX1Q9NSU2 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.84□□□□□ -1.63
TREX1Q9NSU2 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TREX1Q9NSU2 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TREX1Q9NSU2 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TREX1Q9NSU2 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
TREX1Q9NSU2 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
TREX1Q9NSU2 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 CR788268.1-201ENST00000603931 1809 ntBASIC4.83□□□□□ -1.64
TREX1Q9NSU2 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 TLK1P1-201ENST00000456760 2440 ntBASIC4.83□□□□□ -1.64
TREX1Q9NSU2 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 ZNF652P1-201ENST00000442420 1309 ntBASIC4.83□□□□□ -1.64
TREX1Q9NSU2 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 UBBP2-201ENST00000376781 231 ntBASIC4.83□□□□□ -1.64
TREX1Q9NSU2 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 AL592291.1-201ENST00000403830 352 ntBASIC4.83□□□□□ -1.64
TREX1Q9NSU2 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 AC093162.1-201ENST00000419682 124 ntBASIC4.83□□□□□ -1.64
TREX1Q9NSU2 LINC00993-201ENST00000420453 540 ntBASIC4.83□□□□□ -1.64
TREX1Q9NSU2 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 RPS17P8-201ENST00000434525 335 ntBASIC4.83□□□□□ -1.64
TREX1Q9NSU2 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 TRY2P-201ENST00000448860 689 ntBASIC4.83□□□□□ -1.64
TREX1Q9NSU2 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 RPS4XP12-201ENST00000461747 709 ntBASIC4.83□□□□□ -1.64
TREX1Q9NSU2 RPSAP50-201ENST00000481955 852 ntBASIC4.83□□□□□ -1.64
TREX1Q9NSU2 RN7SL629P-201ENST00000489622 285 ntBASIC4.83□□□□□ -1.64
TREX1Q9NSU2 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 KCTD9P6-201ENST00000522306 950 ntBASIC4.83□□□□□ -1.64
TREX1Q9NSU2 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 OR10G5P-201ENST00000532733 358 ntBASIC4.83□□□□□ -1.64
TREX1Q9NSU2 GCSHP4-201ENST00000538792 439 ntBASIC4.83□□□□□ -1.64
TREX1Q9NSU2 FKBP1BP1-201ENST00000553366 325 ntBASIC4.83□□□□□ -1.64
TREX1Q9NSU2 SETP1-201ENST00000556014 845 ntBASIC4.83□□□□□ -1.64
TREX1Q9NSU2 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 AC010547.7-201ENST00000570323 333 ntBASIC4.83□□□□□ -1.64
TREX1Q9NSU2 EIF3FP1-201ENST00000613970 806 ntBASIC4.83□□□□□ -1.64
TREX1Q9NSU2 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 SALL4P2-201ENST00000423288 2910 ntBASIC4.83□□□□□ -1.64
TREX1Q9NSU2 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 AL359922.3-201ENST00000624779 1670 ntBASIC4.83□□□□□ -1.64
TREX1Q9NSU2 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.83□□□□□ -1.64
TREX1Q9NSU2 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TREX1Q9NSU2 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TREX1Q9NSU2 RN7SKP104-201ENST00000362605 328 ntBASIC4.82□□□□□ -1.64
TREX1Q9NSU2 CHMP1B2P-201ENST00000399581 597 ntBASIC4.82□□□□□ -1.64
TREX1Q9NSU2 AL359643.1-201ENST00000404109 423 ntBASIC4.82□□□□□ -1.64
TREX1Q9NSU2 MIR1178-201ENST00000408396 91 ntBASIC4.82□□□□□ -1.64
TREX1Q9NSU2 MIR1271-201ENST00000408537 86 ntBASIC4.82□□□□□ -1.64
TREX1Q9NSU2 RN7SKP213-201ENST00000410746 298 ntBASIC4.82□□□□□ -1.64
TREX1Q9NSU2 CHEK2P3-201ENST00000416118 248 ntBASIC4.82□□□□□ -1.64
TREX1Q9NSU2 RPL7P57-201ENST00000423238 740 ntBASIC4.82□□□□□ -1.64
TREX1Q9NSU2 RPL34P6-201ENST00000432390 345 ntBASIC4.82□□□□□ -1.64
TREX1Q9NSU2 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.82□□□□□ -1.64
TREX1Q9NSU2 AC004938.1-201ENST00000438468 308 ntBASIC4.82□□□□□ -1.64
TREX1Q9NSU2 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.82□□□□□ -1.64
TREX1Q9NSU2 SLC25A18P1-201ENST00000449385 454 ntBASIC4.82□□□□□ -1.64
TREX1Q9NSU2 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.82□□□□□ -1.64
TREX1Q9NSU2 OR2AF1P-201ENST00000454899 889 ntBASIC4.82□□□□□ -1.64
TREX1Q9NSU2 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.82□□□□□ -1.64
TREX1Q9NSU2 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.82□□□□□ -1.64
TREX1Q9NSU2 MORF4L1P3-201ENST00000525966 950 ntBASIC4.82□□□□□ -1.64
TREX1Q9NSU2 RN7SL802P-201ENST00000577858 299 ntBASIC4.82□□□□□ -1.64
TREX1Q9NSU2 AP005262.1-201ENST00000582646 997 ntBASIC4.82□□□□□ -1.64
TREX1Q9NSU2 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.82□□□□□ -1.64
TREX1Q9NSU2 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.82□□□□□ -1.64
TREX1Q9NSU2 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.82□□□□□ -1.64
TREX1Q9NSU2 AC087763.1-201ENST00000603391 286 ntBASIC4.82□□□□□ -1.64
TREX1Q9NSU2 RNF138P2-201ENST00000603490 592 ntBASIC4.82□□□□□ -1.64
TREX1Q9NSU2 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.82□□□□□ -1.64
TREX1Q9NSU2 AC015804.1-201ENST00000622935 435 ntBASIC4.82□□□□□ -1.64
TREX1Q9NSU2 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.82□□□□□ -1.64
TREX1Q9NSU2 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.82□□□□□ -1.64
TREX1Q9NSU2 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TREX1Q9NSU2 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.82□□□□□ -1.64
TREX1Q9NSU2 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TREX1Q9NSU2 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TREX1Q9NSU2 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TREX1Q9NSU2 MIPEPP2-201ENST00000422560 1819 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms