Protein–RNA interactions for Protein: Q9BYQ2

KRTAP9-4, Keratin-associated protein 9-4, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-4Q9BYQ2 FRMD1-201ENST00000283309 3067 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 CYB561A3-201ENST00000294072 3061 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 TSPYL6-201ENST00000317802 3089 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 KLHDC4-205ENST00000446344 4444 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 SLC4A1-202ENST00000399246 3855 ntTSL 5 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 ITPRIPL1-201ENST00000361124 4295 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 HGSNAT-201ENST00000379644 5236 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 LINC01588-203ENST00000529902 4279 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 CATSPERG-202ENST00000409235 3746 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 STAT4-201ENST00000358470 2769 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 USP47-202ENST00000339865 7775 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 CCAR2-206ENST00000520861 3560 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 TRIM62-201ENST00000291416 3437 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 CD300A-201ENST00000310828 631 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 RNU105C-201ENST00000362342 209 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 SNORD114-7-201ENST00000362520 77 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 RNU4-15P-201ENST00000362613 141 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 RNU6-78P-201ENST00000362897 107 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 RNU6-940P-201ENST00000363433 104 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 SNORA18.3-201ENST00000384122 132 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 SNORA8.1-201ENST00000384250 140 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 MIR520G-201ENST00000385064 90 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 MIR545-201ENST00000385085 106 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 MIR520H-201ENST00000385126 88 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 TRBV5-5-201ENST00000390372 350 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 CCR3-203ENST00000395942 1201 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 MIR1273A-201ENST00000408826 103 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 RNU2-49P-201ENST00000410666 184 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 CNN2P9-201ENST00000417134 909 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 CYCSP10-201ENST00000417973 294 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 RPL13AP17-202ENST00000421208 581 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 AL512326.3-201ENST00000424885 171 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 MTND6P12-201ENST00000428247 522 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 NDP-AS1-201ENST00000435093 737 ntTSL 3 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 ANO7L1-201ENST00000442385 328 ntTSL 3 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 HMGN2P11-201ENST00000446054 403 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC073135.1-201ENST00000451150 775 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC245102.1-201ENST00000454989 520 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 CLCP1-201ENST00000455251 388 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 snoU13.7-201ENST00000459220 104 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 RN7SL266P-201ENST00000465140 289 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 RN7SL782P-201ENST00000476421 294 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 RPL36AP48-201ENST00000485521 314 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC091675.1-201ENST00000486251 351 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 RPS23P4-201ENST00000487908 423 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC008581.1-201ENST00000512650 385 ntTSL 3 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC008885.1-201ENST00000514930 301 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 AL589743.2-201ENST00000547821 602 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC010536.2-201ENST00000563036 338 ntTSL 3 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC093249.2-201ENST00000563540 482 ntTSL 3 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC026954.3-201ENST00000572417 421 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC130343.1-201ENST00000576540 459 ntTSL 3 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 MIR2681-201ENST00000581814 105 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 MIR4647-201ENST00000583964 80 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 CNFN-202ENST00000597255 502 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC011500.2-201ENST00000600089 440 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 BOLA2P2-201ENST00000603861 250 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC111186.1-201ENST00000604684 130 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 MIR8079-201ENST00000610873 72 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 AL627230.8-201ENST00000613335 202 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 MIR6864-201ENST00000617935 70 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 SNORD3D-201ENST00000619178 218 ntBASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 BTN3A1-203ENST00000414912 2077 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 WARS-238ENST00000557135 2080 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 WHRN-204ENST00000374059 3278 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 CWC22-202ENST00000410053 3280 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 WDR33-204ENST00000409658 3104 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 SNCA-206ENST00000420646 3127 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 NUP85-203ENST00000540768 1926 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 FBXO10-202ENST00000432825 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 ITGA4-203ENST00000397033 4189 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 ATP1A1-211ENST00000537345 3763 ntAPPRIS ALT1 TSL 2 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 GATAD2B-201ENST00000368655 7478 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 LARP1B-202ENST00000394288 2151 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 OC90-201ENST00000254627 1782 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 GPR176-202ENST00000543580 1755 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 CHMP1B-201ENST00000526991 3054 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 CUL1-203ENST00000602748 3054 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms