Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 PRNCR1-201ENST00000635449 12727 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
USB1Q9BQ65 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
USB1Q9BQ65 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
USB1Q9BQ65 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
USB1Q9BQ65 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
USB1Q9BQ65 MGC27382-202ENST00000436742 1993 ntTSL 2 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
USB1Q9BQ65 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
USB1Q9BQ65 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
USB1Q9BQ65 FMO5-202ENST00000369272 2168 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
USB1Q9BQ65 MTND5P27-201ENST00000428871 1720 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
USB1Q9BQ65 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
USB1Q9BQ65 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USB1Q9BQ65 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
USB1Q9BQ65 HSP90AB7P-201ENST00000450068 2454 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 AL162171.3-201ENST00000617439 3178 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
USB1Q9BQ65 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 RNU5E-8P-201ENST00000363502 116 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 AL031679.1-201ENST00000400616 525 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 AL161787.1-201ENST00000401543 174 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 AC006455.4-201ENST00000418297 528 ntTSL 4 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 AC018865.2-201ENST00000423631 129 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 HMGN2P24-201ENST00000433516 273 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 AP002856.4-201ENST00000441638 569 ntTSL 4 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 AC073188.4-201ENST00000450077 528 ntTSL 4 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 LINC00572-201ENST00000450264 575 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
USB1Q9BQ65 AC098828.2-201ENST00000452342 573 ntTSL 2 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 AC092569.1-201ENST00000455192 258 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 AP1S2P1-201ENST00000457344 379 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 RPS15AP1-201ENST00000457423 391 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 AC011005.3-201ENST00000491624 395 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 RPL37P23-201ENST00000492641 294 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 AC008667.3-201ENST00000506892 553 ntTSL 4 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 AC109481.1-201ENST00000509173 282 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 LINC01170-201ENST00000519703 406 ntTSL 5 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 IMMP1LP2-201ENST00000552954 492 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 MIR4790-201ENST00000577799 79 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 MIR3714-201ENST00000579507 65 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
USB1Q9BQ65 VDAC1P5-201ENST00000603132 844 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 AC123788.2-201ENST00000612290 283 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 uc_338.11-201ENST00000619132 160 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 TRIM37-214ENST00000625984 204 ntTSL 5 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 AL355480.4-201ENST00000626823 69 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 U6.101-201ENST00000637707 76 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USB1Q9BQ65 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 DDX11L16-201ENST00000507418 1306 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 PCDH18-205ENST00000511115 1331 ntTSL 2 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USB1Q9BQ65 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
USB1Q9BQ65 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 KPNA2P2-201ENST00000419546 1489 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 AC004972.1-201ENST00000623934 2209 ntBASIC7.16□□□□□ -1.26
USB1Q9BQ65 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
USB1Q9BQ65 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
USB1Q9BQ65 MS4A10-201ENST00000308287 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USB1Q9BQ65 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
USB1Q9BQ65 GLRA3-202ENST00000340217 3065 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USB1Q9BQ65 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
USB1Q9BQ65 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USB1Q9BQ65 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USB1Q9BQ65 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
USB1Q9BQ65 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
USB1Q9BQ65 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
USB1Q9BQ65 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
USB1Q9BQ65 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC7.15□□□□□ -1.26
USB1Q9BQ65 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.15□□□□□ -1.26
USB1Q9BQ65 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
USB1Q9BQ65 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC7.15□□□□□ -1.26
USB1Q9BQ65 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.15□□□□□ -1.26
USB1Q9BQ65 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
USB1Q9BQ65 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
USB1Q9BQ65 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
USB1Q9BQ65 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.26
USB1Q9BQ65 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.15□□□□□ -1.26
USB1Q9BQ65 AC130304.1-201ENST00000622942 2385 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.26
USB1Q9BQ65 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
USB1Q9BQ65 RNU6-238P-201ENST00000363313 106 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 Y_RNA.307-201ENST00000365022 117 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 Y_RNA.364-201ENST00000365532 101 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms