Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 CKS1BP1-201ENST00000555221 240 ntBASIC4.61□□□□□ -1.67
SSX3Q99909 NMNAT1P5-201ENST00000559657 841 ntBASIC4.61□□□□□ -1.67
SSX3Q99909 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.61□□□□□ -1.67
SSX3Q99909 AC110743.1-201ENST00000584870 478 ntBASIC4.61□□□□□ -1.67
SSX3Q99909 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.61□□□□□ -1.67
SSX3Q99909 AL589674.2-201ENST00000604304 337 ntBASIC4.61□□□□□ -1.67
SSX3Q99909 AC090525.3-201ENST00000605601 189 ntBASIC4.61□□□□□ -1.67
SSX3Q99909 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.61□□□□□ -1.67
SSX3Q99909 AL096803.3-201ENST00000609032 532 ntBASIC4.61□□□□□ -1.67
SSX3Q99909 AP000894.4-201ENST00000610185 483 ntBASIC4.61□□□□□ -1.67
SSX3Q99909 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSX3Q99909 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.61□□□□□ -1.67
SSX3Q99909 AC021766.1-201ENST00000624404 741 ntBASIC4.61□□□□□ -1.67
SSX3Q99909 AC007683.2-201ENST00000624681 714 ntBASIC4.61□□□□□ -1.67
SSX3Q99909 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.61□□□□□ -1.67
SSX3Q99909 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSX3Q99909 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.61□□□□□ -1.67
SSX3Q99909 SRRM1P3-201ENST00000426911 2678 ntBASIC4.61□□□□□ -1.67
SSX3Q99909 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSX3Q99909 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSX3Q99909 MRE11P1-201ENST00000464884 2127 ntBASIC4.61□□□□□ -1.67
SSX3Q99909 CYP1D1P-201ENST00000416662 1433 ntBASIC4.61□□□□□ -1.67
SSX3Q99909 AC114786.1-201ENST00000512892 1415 ntBASIC4.61□□□□□ -1.67
SSX3Q99909 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.61□□□□□ -1.67
SSX3Q99909 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSX3Q99909 YES1P1-201ENST00000418510 1628 ntBASIC4.61□□□□□ -1.67
SSX3Q99909 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSX3Q99909 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSX3Q99909 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSX3Q99909 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSX3Q99909 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SSX3Q99909 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SSX3Q99909 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
SSX3Q99909 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
SSX3Q99909 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSX3Q99909 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSX3Q99909 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SSX3Q99909 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSX3Q99909 RN7SKP229-201ENST00000410465 302 ntBASIC4.6□□□□□ -1.67
SSX3Q99909 OR6E1P-201ENST00000414424 923 ntBASIC4.6□□□□□ -1.67
SSX3Q99909 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.6□□□□□ -1.67
SSX3Q99909 OR10T1P-201ENST00000424327 947 ntBASIC4.6□□□□□ -1.67
SSX3Q99909 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX3Q99909 NPM1P24-201ENST00000428039 894 ntBASIC4.6□□□□□ -1.67
SSX3Q99909 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX3Q99909 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX3Q99909 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX3Q99909 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX3Q99909 MTND4P15-201ENST00000437913 1033 ntBASIC4.6□□□□□ -1.67
SSX3Q99909 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.6□□□□□ -1.67
SSX3Q99909 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSX3Q99909 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.6□□□□□ -1.67
SSX3Q99909 AL357520.1-201ENST00000441557 453 ntBASIC4.6□□□□□ -1.67
SSX3Q99909 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.6□□□□□ -1.67
SSX3Q99909 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX3Q99909 AC004129.2-201ENST00000457229 287 ntBASIC4.6□□□□□ -1.67
SSX3Q99909 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX3Q99909 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.6□□□□□ -1.67
SSX3Q99909 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.6□□□□□ -1.67
SSX3Q99909 AC093663.2-201ENST00000484625 313 ntBASIC4.6□□□□□ -1.67
SSX3Q99909 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX3Q99909 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSX3Q99909 SUMO1P1-201ENST00000497904 306 ntBASIC4.6□□□□□ -1.67
SSX3Q99909 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX3Q99909 AC105384.2-201ENST00000508433 640 ntBASIC4.6□□□□□ -1.67
SSX3Q99909 NPM1P6-201ENST00000521088 871 ntBASIC4.6□□□□□ -1.67
SSX3Q99909 MRPS16P1-201ENST00000523462 412 ntBASIC4.6□□□□□ -1.67
SSX3Q99909 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.6□□□□□ -1.67
SSX3Q99909 OR8K2P-201ENST00000524645 927 ntBASIC4.6□□□□□ -1.67
SSX3Q99909 OR4A17P-201ENST00000526032 904 ntBASIC4.6□□□□□ -1.67
SSX3Q99909 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.6□□□□□ -1.67
SSX3Q99909 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX3Q99909 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX3Q99909 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX3Q99909 NOP56P3-201ENST00000549457 385 ntBASIC4.6□□□□□ -1.67
SSX3Q99909 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.6□□□□□ -1.67
SSX3Q99909 HMGB3P26-201ENST00000560051 582 ntBASIC4.6□□□□□ -1.67
SSX3Q99909 DPPA2P4-201ENST00000563717 878 ntBASIC4.6□□□□□ -1.67
SSX3Q99909 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
SSX3Q99909 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX3Q99909 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SSX3Q99909 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SSX3Q99909 AC005242.1-201ENST00000585658 438 ntBASIC4.6□□□□□ -1.67
SSX3Q99909 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX3Q99909 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.6□□□□□ -1.67
SSX3Q99909 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSX3Q99909 AC063977.5-201ENST00000601044 974 ntBASIC4.6□□□□□ -1.67
SSX3Q99909 AC104695.2-201ENST00000605056 775 ntBASIC4.6□□□□□ -1.67
SSX3Q99909 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSX3Q99909 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX3Q99909 AC131238.1-201ENST00000617135 328 ntBASIC4.6□□□□□ -1.67
SSX3Q99909 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.6□□□□□ -1.67
SSX3Q99909 AC139769.3-201ENST00000618383 175 ntBASIC4.6□□□□□ -1.67
SSX3Q99909 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.6□□□□□ -1.67
SSX3Q99909 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSX3Q99909 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSX3Q99909 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSX3Q99909 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
SSX3Q99909 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SSX3Q99909 AP000542.2-201ENST00000623199 6179 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 422.4 ms