Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RPS7P14-201ENST00000426405 583 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 AL591212.2-201ENST00000433923 257 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-CQ95604 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC7.61□□□□□ -1.19
HLA-CQ95604 DHFRP3-201ENST00000455595 559 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 AC005550.2-201ENST00000476382 318 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 RPS3AP50-201ENST00000487064 803 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 MTCO1P29-201ENST00000496868 288 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 AC025674.1-201ENST00000507074 324 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 AC011411.1-201ENST00000509592 876 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 TMEM248P1-201ENST00000510579 951 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC7.61□□□□□ -1.19
HLA-CQ95604 OR5M6P-201ENST00000530227 937 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 ZNF705CP-201ENST00000530515 889 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 AC027026.1-201ENST00000532323 742 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.61□□□□□ -1.19
HLA-CQ95604 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC7.61□□□□□ -1.19
HLA-CQ95604 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC7.61□□□□□ -1.19
HLA-CQ95604 DNAJC8P1-201ENST00000554535 372 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 MIR4503-201ENST00000582187 83 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC7.61□□□□□ -1.19
HLA-CQ95604 AC080078.3-201ENST00000605407 463 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 AC090525.3-201ENST00000605601 189 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 BX664608.1-201ENST00000610519 487 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC7.61□□□□□ -1.19
HLA-CQ95604 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
HLA-CQ95604 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-CQ95604 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC7.61□□□□□ -1.19
HLA-CQ95604 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.61□□□□□ -1.19
HLA-CQ95604 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.61□□□□□ -1.19
HLA-CQ95604 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-CQ95604 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-CQ95604 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-CQ95604 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC7.61□□□□□ -1.19
HLA-CQ95604 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
HLA-CQ95604 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC7.61□□□□□ -1.19
HLA-CQ95604 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-CQ95604 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
HLA-CQ95604 FANCD2P2-201ENST00000437591 1400 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-CQ95604 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
HLA-CQ95604 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC7.6□□□□□ -1.19
HLA-CQ95604 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-CQ95604 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
HLA-CQ95604 MAPK10-354ENST00000641823 2732 ntBASIC7.6□□□□□ -1.19
HLA-CQ95604 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-CQ95604 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-CQ95604 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-CQ95604 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.6□□□□□ -1.19
HLA-CQ95604 DNAH10-209ENST00000614082 3484 ntTSL 5 BASIC7.6□□□□□ -1.19
HLA-CQ95604 FAM9C-201ENST00000333995 3361 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-CQ95604 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-CQ95604 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-CQ95604 AC010894.1-201ENST00000313760 361 ntBASIC7.6□□□□□ -1.19
HLA-CQ95604 NACAP2-201ENST00000318548 624 ntBASIC7.6□□□□□ -1.19
HLA-CQ95604 IGKV7-3-201ENST00000357453 298 ntBASIC7.6□□□□□ -1.19
HLA-CQ95604 AC117470.1-201ENST00000381974 330 ntBASIC7.6□□□□□ -1.19
HLA-CQ95604 MIR320B1-201ENST00000390209 79 ntBASIC7.6□□□□□ -1.19
HLA-CQ95604 AL121972.1-201ENST00000402023 252 ntBASIC7.6□□□□□ -1.19
HLA-CQ95604 AL353777.1-201ENST00000425552 326 ntBASIC7.6□□□□□ -1.19
HLA-CQ95604 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC7.6□□□□□ -1.19
HLA-CQ95604 Z83313.1-201ENST00000433780 718 ntBASIC7.6□□□□□ -1.19
HLA-CQ95604 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.6□□□□□ -1.19
HLA-CQ95604 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC7.6□□□□□ -1.19
HLA-CQ95604 PRPF38AP1-201ENST00000451976 933 ntBASIC7.6□□□□□ -1.19
HLA-CQ95604 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.6□□□□□ -1.19
HLA-CQ95604 HMGN2P26-201ENST00000463169 339 ntBASIC7.6□□□□□ -1.19
HLA-CQ95604 AC078785.3-201ENST00000476607 425 ntBASIC7.6□□□□□ -1.19
HLA-CQ95604 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-CQ95604 AC021220.1-201ENST00000507445 630 ntBASIC7.6□□□□□ -1.19
HLA-CQ95604 NPM1P41-201ENST00000512920 831 ntBASIC7.6□□□□□ -1.19
HLA-CQ95604 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC7.6□□□□□ -1.19
HLA-CQ95604 RNU4-49P-201ENST00000516080 140 ntBASIC7.6□□□□□ -1.19
HLA-CQ95604 RN7SKP256-201ENST00000517201 314 ntBASIC7.6□□□□□ -1.19
HLA-CQ95604 AC022616.6-201ENST00000520479 119 ntBASIC7.6□□□□□ -1.19
HLA-CQ95604 TRIM51DP-201ENST00000529746 596 ntBASIC7.6□□□□□ -1.19
HLA-CQ95604 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
HLA-CQ95604 AC026826.3-201ENST00000561747 158 ntBASIC7.6□□□□□ -1.19
HLA-CQ95604 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.6□□□□□ -1.19
HLA-CQ95604 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7.6□□□□□ -1.19
HLA-CQ95604 SKA2-203ENST00000578105 689 ntTSL 2 BASIC7.6□□□□□ -1.19
HLA-CQ95604 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.6□□□□□ -1.19
HLA-CQ95604 AP005329.3-201ENST00000609924 686 ntBASIC7.6□□□□□ -1.19
HLA-CQ95604 AC022400.9-201ENST00000623633 273 ntBASIC7.6□□□□□ -1.19
HLA-CQ95604 SRP54-214ENST00000630962 162 ntTSL 5 BASIC7.6□□□□□ -1.19
HLA-CQ95604 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
HLA-CQ95604 SLFN12L-202ENST00000361112 2752 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
HLA-CQ95604 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.6□□□□□ -1.19
HLA-CQ95604 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-CQ95604 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-CQ95604 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
HLA-CQ95604 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HLA-CQ95604 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
HLA-CQ95604 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
HLA-CQ95604 OR4G1P-203ENST00000641984 1631 ntBASIC7.6□□□□□ -1.19
HLA-CQ95604 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
HLA-CQ95604 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC7.59□□□□□ -1.19
HLA-CQ95604 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
HLA-CQ95604 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms