Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.5□□□□□ -1.37
ERVFC1P60507 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
ERVFC1P60507 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ERVFC1P60507 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ERVFC1P60507 AC027088.4-201ENST00000611559 1947 ntBASIC6.5□□□□□ -1.37
ERVFC1P60507 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
ERVFC1P60507 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ERVFC1P60507 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
ERVFC1P60507 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.5□□□□□ -1.37
ERVFC1P60507 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ERVFC1P60507 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ERVFC1P60507 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ERVFC1P60507 MAPK10-287ENST00000641217 3037 ntBASIC6.5□□□□□ -1.37
ERVFC1P60507 AP000866.6-201ENST00000638898 3579 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ERVFC1P60507 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ERVFC1P60507 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ERVFC1P60507 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ERVFC1P60507 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ERVFC1P60507 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
ERVFC1P60507 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.49□□□□□ -1.37
ERVFC1P60507 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.49□□□□□ -1.37
ERVFC1P60507 AL391994.1-201ENST00000254724 282 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 OR4G2P-201ENST00000328113 903 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 OR11H13P-201ENST00000359695 979 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 U3.4-201ENST00000363352 213 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 RNU6-1331P-201ENST00000363658 106 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
ERVFC1P60507 AGR3-202ENST00000402239 563 ntTSL 2 BASIC6.49□□□□□ -1.37
ERVFC1P60507 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC6.49□□□□□ -1.37
ERVFC1P60507 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.49□□□□□ -1.37
ERVFC1P60507 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC6.49□□□□□ -1.37
ERVFC1P60507 OR4K6P-201ENST00000416478 897 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 CCDC58P2-201ENST00000417131 366 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.49□□□□□ -1.37
ERVFC1P60507 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC6.49□□□□□ -1.37
ERVFC1P60507 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.49□□□□□ -1.37
ERVFC1P60507 RAB28P3-201ENST00000448325 597 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 OR51B8P-201ENST00000449892 769 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.49□□□□□ -1.37
ERVFC1P60507 GEMIN2P1-201ENST00000454246 752 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC6.49□□□□□ -1.37
ERVFC1P60507 SNX18P26-201ENST00000458433 740 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 RPL31P58-201ENST00000469001 379 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 CCDC75P1-201ENST00000469247 791 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 OR4G11P-201ENST00000492842 939 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 MTND2P33-201ENST00000506452 1031 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 FABP5P5-201ENST00000515537 406 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.49□□□□□ -1.37
ERVFC1P60507 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC6.49□□□□□ -1.37
ERVFC1P60507 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.49□□□□□ -1.37
ERVFC1P60507 AP001317.1-201ENST00000531194 960 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.49□□□□□ -1.37
ERVFC1P60507 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ERVFC1P60507 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC6.49□□□□□ -1.37
ERVFC1P60507 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC6.49□□□□□ -1.37
ERVFC1P60507 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.49□□□□□ -1.37
ERVFC1P60507 AL137072.1-201ENST00000603444 466 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 AC090186.1-201ENST00000605991 572 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.49□□□□□ -1.37
ERVFC1P60507 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.49□□□□□ -1.37
ERVFC1P60507 AC096861.1-201ENST00000616652 240 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.49□□□□□ -1.37
ERVFC1P60507 AC010435.1-201ENST00000623353 1177 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 AC015726.3-201ENST00000624501 418 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC6.49□□□□□ -1.37
ERVFC1P60507 SAMMSON-209ENST00000641222 1100 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 MIR193BHG-214ENST00000641765 509 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 AC024587.1-201ENST00000505925 2157 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
ERVFC1P60507 AC092447.7-201ENST00000422212 1621 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.49□□□□□ -1.37
ERVFC1P60507 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
ERVFC1P60507 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ERVFC1P60507 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
ERVFC1P60507 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ERVFC1P60507 ZNF402P-201ENST00000404435 3100 ntBASIC6.49□□□□□ -1.37
ERVFC1P60507 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
ERVFC1P60507 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ERVFC1P60507 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.49□□□□□ -1.37
ERVFC1P60507 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.49□□□□□ -1.37
ERVFC1P60507 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ERVFC1P60507 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
ERVFC1P60507 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ERVFC1P60507 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
ERVFC1P60507 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
ERVFC1P60507 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.48□□□□□ -1.37
ERVFC1P60507 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
ERVFC1P60507 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
ERVFC1P60507 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
ERVFC1P60507 AL672167.1-206ENST00000356293 943 ntBASIC6.48□□□□□ -1.37
ERVFC1P60507 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ERVFC1P60507 RNA5SP478-201ENST00000364657 115 ntBASIC6.48□□□□□ -1.37
ERVFC1P60507 Y_RNA.359-201ENST00000365498 102 ntBASIC6.48□□□□□ -1.37
ERVFC1P60507 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
ERVFC1P60507 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.48□□□□□ -1.37
ERVFC1P60507 NPM1P38-201ENST00000403835 865 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms