Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 NPM1P33-201ENST00000438918 872 ntBASIC4.54□□□□□ -1.68
CLDN18P56856 OR7E125P-201ENST00000443450 846 ntBASIC4.54□□□□□ -1.68
CLDN18P56856 MTCO3P17-201ENST00000443775 513 ntBASIC4.54□□□□□ -1.68
CLDN18P56856 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN18P56856 NPM1P29-201ENST00000483112 803 ntBASIC4.54□□□□□ -1.68
CLDN18P56856 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN18P56856 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN18P56856 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN18P56856 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN18P56856 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN18P56856 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN18P56856 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN18P56856 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN18P56856 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN18P56856 MIR4436B2-201ENST00000581415 91 ntBASIC4.54□□□□□ -1.68
CLDN18P56856 MIR4436B1-201ENST00000583272 91 ntBASIC4.54□□□□□ -1.68
CLDN18P56856 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN18P56856 BNIP3P32-201ENST00000600015 554 ntBASIC4.54□□□□□ -1.68
CLDN18P56856 AC108359.1-201ENST00000616451 1211 ntBASIC4.54□□□□□ -1.68
CLDN18P56856 AL445528.2-201ENST00000620582 470 ntBASIC4.54□□□□□ -1.68
CLDN18P56856 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN18P56856 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
CLDN18P56856 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN18P56856 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN18P56856 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN18P56856 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN18P56856 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CLDN18P56856 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.53□□□□□ -1.68
CLDN18P56856 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN18P56856 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
CLDN18P56856 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CLDN18P56856 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN18P56856 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CLDN18P56856 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN18P56856 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.53□□□□□ -1.68
CLDN18P56856 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN18P56856 AP002530.1-201ENST00000405705 684 ntBASIC4.53□□□□□ -1.68
CLDN18P56856 SNORA77-201ENST00000408716 125 ntBASIC4.53□□□□□ -1.68
CLDN18P56856 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.53□□□□□ -1.68
CLDN18P56856 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN18P56856 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.53□□□□□ -1.68
CLDN18P56856 AL590609.2-201ENST00000421430 368 ntBASIC4.53□□□□□ -1.68
CLDN18P56856 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN18P56856 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.53□□□□□ -1.68
CLDN18P56856 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.53□□□□□ -1.68
CLDN18P56856 RPS29P9-201ENST00000440360 171 ntBASIC4.53□□□□□ -1.68
CLDN18P56856 SUMO2P1-206ENST00000445436 284 ntBASIC4.53□□□□□ -1.68
CLDN18P56856 RPL7L1P1-201ENST00000448259 785 ntBASIC4.53□□□□□ -1.68
CLDN18P56856 TCEA1P1-201ENST00000449716 880 ntBASIC4.53□□□□□ -1.68
CLDN18P56856 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN18P56856 MTCYBP14-201ENST00000457471 715 ntBASIC4.53□□□□□ -1.68
CLDN18P56856 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN18P56856 RPL35AP28-201ENST00000459730 331 ntBASIC4.53□□□□□ -1.68
CLDN18P56856 AC091180.1-201ENST00000462104 372 ntBASIC4.53□□□□□ -1.68
CLDN18P56856 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN18P56856 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.53□□□□□ -1.68
CLDN18P56856 AC005412.2-201ENST00000492004 341 ntBASIC4.53□□□□□ -1.68
CLDN18P56856 AC140172.1-201ENST00000502928 141 ntBASIC4.53□□□□□ -1.68
CLDN18P56856 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN18P56856 SNORD116-30-201ENST00000516468 85 ntBASIC4.53□□□□□ -1.68
CLDN18P56856 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.53□□□□□ -1.68
CLDN18P56856 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.53□□□□□ -1.68
CLDN18P56856 AC005000.1-201ENST00000536192 288 ntBASIC4.53□□□□□ -1.68
CLDN18P56856 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN18P56856 AC008033.2-201ENST00000542626 177 ntBASIC4.53□□□□□ -1.68
CLDN18P56856 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN18P56856 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.53□□□□□ -1.68
CLDN18P56856 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.53□□□□□ -1.68
CLDN18P56856 MIR4472-2-201ENST00000582069 67 ntBASIC4.53□□□□□ -1.68
CLDN18P56856 AC008536.1-201ENST00000602872 669 ntBASIC4.53□□□□□ -1.68
CLDN18P56856 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN18P56856 AC004948.1-201ENST00000609858 672 ntBASIC4.53□□□□□ -1.68
CLDN18P56856 AL049539.1-201ENST00000611964 459 ntBASIC4.53□□□□□ -1.68
CLDN18P56856 AC026367.3-201ENST00000619032 590 ntBASIC4.53□□□□□ -1.68
CLDN18P56856 AC105105.5-201ENST00000622635 1294 ntBASIC4.53□□□□□ -1.68
CLDN18P56856 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.53□□□□□ -1.68
CLDN18P56856 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN18P56856 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN18P56856 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN18P56856 AC092376.2-201ENST00000622621 4116 ntBASIC4.53□□□□□ -1.68
CLDN18P56856 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CLDN18P56856 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN18P56856 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN18P56856 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN18P56856 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.53□□□□□ -1.68
CLDN18P56856 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN18P56856 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN18P56856 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN18P56856 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN18P56856 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
CLDN18P56856 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.53□□□□□ -1.69
CLDN18P56856 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN18P56856 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CLDN18P56856 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.52□□□□□ -1.69
CLDN18P56856 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN18P56856 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN18P56856 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.52□□□□□ -1.69
CLDN18P56856 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN18P56856 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN18P56856 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms