Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.89□□□□□ -1.63
CXCL12P48061 AC241377.1-201ENST00000619797 406 ntBASIC4.89□□□□□ -1.63
CXCL12P48061 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CXCL12P48061 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.89□□□□□ -1.63
CXCL12P48061 AL355834.1-201ENST00000556602 3965 ntBASIC4.89□□□□□ -1.63
CXCL12P48061 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.89□□□□□ -1.63
CXCL12P48061 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CXCL12P48061 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
CXCL12P48061 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CXCL12P48061 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.88□□□□□ -1.63
CXCL12P48061 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CXCL12P48061 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CXCL12P48061 OR56B2P-202ENST00000641377 2453 ntBASIC4.88□□□□□ -1.63
CXCL12P48061 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CXCL12P48061 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CXCL12P48061 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.88□□□□□ -1.63
CXCL12P48061 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.88□□□□□ -1.63
CXCL12P48061 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.88□□□□□ -1.63
CXCL12P48061 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CXCL12P48061 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CXCL12P48061 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
CXCL12P48061 SNORA48.4-201ENST00000391089 134 ntBASIC4.88□□□□□ -1.63
CXCL12P48061 U3.23-201ENST00000391132 200 ntBASIC4.88□□□□□ -1.63
CXCL12P48061 SNORA57.1-201ENST00000391227 145 ntBASIC4.88□□□□□ -1.63
CXCL12P48061 NPM1P37-201ENST00000403105 874 ntBASIC4.88□□□□□ -1.63
CXCL12P48061 AL035079.1-201ENST00000405210 287 ntBASIC4.88□□□□□ -1.63
CXCL12P48061 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.88□□□□□ -1.63
CXCL12P48061 RN7SKP263-201ENST00000411194 309 ntBASIC4.88□□□□□ -1.63
CXCL12P48061 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.88□□□□□ -1.63
CXCL12P48061 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.88□□□□□ -1.63
CXCL12P48061 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.88□□□□□ -1.63
CXCL12P48061 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.88□□□□□ -1.63
CXCL12P48061 RPL7AP28-201ENST00000464513 571 ntBASIC4.88□□□□□ -1.63
CXCL12P48061 AC109327.1-201ENST00000471666 403 ntBASIC4.88□□□□□ -1.63
CXCL12P48061 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC4.88□□□□□ -1.63
CXCL12P48061 AC073358.1-201ENST00000505671 684 ntBASIC4.88□□□□□ -1.63
CXCL12P48061 NPM1P21-201ENST00000513394 762 ntBASIC4.88□□□□□ -1.63
CXCL12P48061 AC026402.1-201ENST00000513642 170 ntBASIC4.88□□□□□ -1.63
CXCL12P48061 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.88□□□□□ -1.63
CXCL12P48061 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.88□□□□□ -1.63
CXCL12P48061 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.88□□□□□ -1.63
CXCL12P48061 AC021483.2-201ENST00000567415 758 ntBASIC4.88□□□□□ -1.63
CXCL12P48061 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.88□□□□□ -1.63
CXCL12P48061 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.88□□□□□ -1.63
CXCL12P48061 AC010424.2-201ENST00000607594 443 ntBASIC4.88□□□□□ -1.63
CXCL12P48061 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CXCL12P48061 AL035461.2-201ENST00000619201 524 ntBASIC4.88□□□□□ -1.63
CXCL12P48061 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CXCL12P48061 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CXCL12P48061 STK3-216ENST00000523601 3107 ntTSL 2 BASIC4.88□□□□□ -1.63
CXCL12P48061 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.88□□□□□ -1.63
CXCL12P48061 AC125336.1-201ENST00000508893 2827 ntBASIC4.88□□□□□ -1.63
CXCL12P48061 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CXCL12P48061 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CXCL12P48061 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CXCL12P48061 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CXCL12P48061 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CXCL12P48061 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CXCL12P48061 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
CXCL12P48061 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CXCL12P48061 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CXCL12P48061 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC4.87□□□□□ -1.63
CXCL12P48061 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CXCL12P48061 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CXCL12P48061 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
CXCL12P48061 AL132656.3-201ENST00000606384 1595 ntBASIC4.87□□□□□ -1.63
CXCL12P48061 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CXCL12P48061 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CXCL12P48061 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CXCL12P48061 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.87□□□□□ -1.63
CXCL12P48061 SNORA70.9-201ENST00000384370 135 ntBASIC4.87□□□□□ -1.63
CXCL12P48061 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CXCL12P48061 ATG4AP1-201ENST00000416893 538 ntBASIC4.87□□□□□ -1.63
CXCL12P48061 UQCRBP1-201ENST00000421129 336 ntBASIC4.87□□□□□ -1.63
CXCL12P48061 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.87□□□□□ -1.63
CXCL12P48061 RPEP3-201ENST00000425462 676 ntBASIC4.87□□□□□ -1.63
CXCL12P48061 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.87□□□□□ -1.63
CXCL12P48061 KCTD10P1-201ENST00000434203 625 ntBASIC4.87□□□□□ -1.63
CXCL12P48061 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.87□□□□□ -1.63
CXCL12P48061 BX679664.2-201ENST00000439282 283 ntBASIC4.87□□□□□ -1.63
CXCL12P48061 AL450023.3-201ENST00000440592 271 ntBASIC4.87□□□□□ -1.63
CXCL12P48061 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.87□□□□□ -1.63
CXCL12P48061 MED28P3-201ENST00000444288 531 ntBASIC4.87□□□□□ -1.63
CXCL12P48061 TAAR4P-201ENST00000454843 1039 ntBASIC4.87□□□□□ -1.63
CXCL12P48061 AC108751.3-201ENST00000461814 1020 ntBASIC4.87□□□□□ -1.63
CXCL12P48061 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.87□□□□□ -1.63
CXCL12P48061 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.87□□□□□ -1.63
CXCL12P48061 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.87□□□□□ -1.63
CXCL12P48061 AC011944.2-201ENST00000624440 683 ntBASIC4.87□□□□□ -1.63
CXCL12P48061 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CXCL12P48061 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CXCL12P48061 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.87□□□□□ -1.63
CXCL12P48061 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
CXCL12P48061 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.87□□□□□ -1.63
CXCL12P48061 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CXCL12P48061 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CXCL12P48061 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CXCL12P48061 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CXCL12P48061 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CXCL12P48061 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms