Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL15A1P39059 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL15A1P39059 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL15A1P39059 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL15A1P39059 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL15A1P39059 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL15A1P39059 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.42□□□□□ -1.38
COL15A1P39059 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
COL15A1P39059 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.42□□□□□ -1.38
COL15A1P39059 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL15A1P39059 AP000568.1-201ENST00000282964 442 ntBASIC6.42□□□□□ -1.38
COL15A1P39059 SNORA27.3-201ENST00000364937 134 ntBASIC6.42□□□□□ -1.38
COL15A1P39059 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL15A1P39059 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL15A1P39059 AL021331.1-201ENST00000402817 582 ntBASIC6.42□□□□□ -1.38
COL15A1P39059 RCC2P2-201ENST00000422174 918 ntBASIC6.42□□□□□ -1.38
COL15A1P39059 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.42□□□□□ -1.38
COL15A1P39059 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC6.42□□□□□ -1.38
COL15A1P39059 AL136231.1-201ENST00000429407 730 ntBASIC6.42□□□□□ -1.38
COL15A1P39059 AL359265.2-201ENST00000434367 631 ntBASIC6.42□□□□□ -1.38
COL15A1P39059 CYCSP42-201ENST00000450823 238 ntBASIC6.42□□□□□ -1.38
COL15A1P39059 AC005412.2-201ENST00000492004 341 ntBASIC6.42□□□□□ -1.38
COL15A1P39059 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.42□□□□□ -1.38
COL15A1P39059 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.42□□□□□ -1.38
COL15A1P39059 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.42□□□□□ -1.38
COL15A1P39059 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.42□□□□□ -1.38
COL15A1P39059 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.42□□□□□ -1.38
COL15A1P39059 RNA5SP439-201ENST00000617595 124 ntBASIC6.42□□□□□ -1.38
COL15A1P39059 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.42□□□□□ -1.38
COL15A1P39059 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
COL15A1P39059 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL15A1P39059 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL15A1P39059 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.42□□□□□ -1.38
COL15A1P39059 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL15A1P39059 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.41□□□□□ -1.38
COL15A1P39059 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COL15A1P39059 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.41□□□□□ -1.38
COL15A1P39059 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL15A1P39059 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
COL15A1P39059 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL15A1P39059 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
COL15A1P39059 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.41□□□□□ -1.38
COL15A1P39059 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL15A1P39059 ADAM24P-201ENST00000398655 2101 ntBASIC6.41□□□□□ -1.38
COL15A1P39059 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.41□□□□□ -1.38
COL15A1P39059 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL15A1P39059 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
COL15A1P39059 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
COL15A1P39059 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL15A1P39059 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL15A1P39059 SNORA62-201ENST00000365493 153 ntBASIC6.41□□□□□ -1.38
COL15A1P39059 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COL15A1P39059 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COL15A1P39059 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.41□□□□□ -1.38
COL15A1P39059 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.41□□□□□ -1.38
COL15A1P39059 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.41□□□□□ -1.38
COL15A1P39059 AC017078.1-201ENST00000416146 368 ntBASIC6.41□□□□□ -1.38
COL15A1P39059 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.41□□□□□ -1.38
COL15A1P39059 MRPS33P4-201ENST00000434892 317 ntBASIC6.41□□□□□ -1.38
COL15A1P39059 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
COL15A1P39059 MTND2P30-201ENST00000456663 382 ntBASIC6.41□□□□□ -1.38
COL15A1P39059 RN7SL443P-201ENST00000464331 290 ntBASIC6.41□□□□□ -1.38
COL15A1P39059 AC011005.3-201ENST00000491624 395 ntBASIC6.41□□□□□ -1.38
COL15A1P39059 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.41□□□□□ -1.38
COL15A1P39059 AC093720.1-201ENST00000505681 714 ntBASIC6.41□□□□□ -1.38
COL15A1P39059 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.41□□□□□ -1.38
COL15A1P39059 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.41□□□□□ -1.38
COL15A1P39059 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.41□□□□□ -1.38
COL15A1P39059 AC020910.3-201ENST00000603701 874 ntBASIC6.41□□□□□ -1.38
COL15A1P39059 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.41□□□□□ -1.38
COL15A1P39059 LINC00216-201ENST00000623548 1126 ntBASIC6.41□□□□□ -1.38
COL15A1P39059 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.41□□□□□ -1.38
COL15A1P39059 AC092451.3-201ENST00000625067 1343 ntBASIC6.41□□□□□ -1.38
COL15A1P39059 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL15A1P39059 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
COL15A1P39059 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.41□□□□□ -1.38
COL15A1P39059 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL15A1P39059 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
COL15A1P39059 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL15A1P39059 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.4□□□□□ -1.38
COL15A1P39059 CDY11P-201ENST00000447168 1651 ntBASIC6.4□□□□□ -1.38
COL15A1P39059 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL15A1P39059 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL15A1P39059 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.38
COL15A1P39059 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.4□□□□□ -1.38
COL15A1P39059 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
COL15A1P39059 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
COL15A1P39059 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.39
COL15A1P39059 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
COL15A1P39059 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL15A1P39059 RNU4-39P-201ENST00000362455 127 ntBASIC6.4□□□□□ -1.39
COL15A1P39059 OR1L6-202ENST00000373684 1044 ntBASIC6.4□□□□□ -1.39
COL15A1P39059 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
COL15A1P39059 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.4□□□□□ -1.39
COL15A1P39059 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.4□□□□□ -1.39
COL15A1P39059 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL15A1P39059 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.4□□□□□ -1.39
COL15A1P39059 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.4□□□□□ -1.39
COL15A1P39059 GTF2IP5-201ENST00000414608 731 ntBASIC6.4□□□□□ -1.39
COL15A1P39059 AC096644.3-201ENST00000416788 338 ntBASIC6.4□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms