Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 RNU6-1263P-201ENST00000384601 106 ntBASIC5.06□□□□□ -1.6
TRIM23P36406 RPS20P25-201ENST00000412447 352 ntBASIC5.06□□□□□ -1.6
TRIM23P36406 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM23P36406 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM23P36406 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM23P36406 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM23P36406 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM23P36406 RPL34P20-201ENST00000442771 351 ntBASIC5.06□□□□□ -1.6
TRIM23P36406 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM23P36406 RPL7P61-201ENST00000451721 751 ntBASIC5.06□□□□□ -1.6
TRIM23P36406 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM23P36406 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM23P36406 COX6B1P5-201ENST00000509843 249 ntBASIC5.06□□□□□ -1.6
TRIM23P36406 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM23P36406 RNU6-751P-201ENST00000516382 101 ntBASIC5.06□□□□□ -1.6
TRIM23P36406 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.06□□□□□ -1.6
TRIM23P36406 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM23P36406 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM23P36406 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM23P36406 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM23P36406 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM23P36406 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM23P36406 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM23P36406 OR1F2P-201ENST00000570470 933 ntBASIC5.06□□□□□ -1.6
TRIM23P36406 MIR4675-201ENST00000577898 77 ntBASIC5.06□□□□□ -1.6
TRIM23P36406 MIR4691-201ENST00000583764 85 ntBASIC5.06□□□□□ -1.6
TRIM23P36406 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM23P36406 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM23P36406 AC024940.4-201ENST00000605507 246 ntBASIC5.06□□□□□ -1.6
TRIM23P36406 AC117490.2-201ENST00000610042 594 ntBASIC5.06□□□□□ -1.6
TRIM23P36406 EIF3FP1-201ENST00000613970 806 ntBASIC5.06□□□□□ -1.6
TRIM23P36406 AC091905.4-201ENST00000623432 202 ntBASIC5.06□□□□□ -1.6
TRIM23P36406 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.06□□□□□ -1.6
TRIM23P36406 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.06□□□□□ -1.6
TRIM23P36406 SMG1P4-204ENST00000523028 4131 ntBASIC5.06□□□□□ -1.6
TRIM23P36406 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM23P36406 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM23P36406 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM23P36406 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM23P36406 NEAT1-202ENST00000501122 22743 ntBASIC5.06□□□□□ -1.6
TRIM23P36406 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM23P36406 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TRIM23P36406 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TRIM23P36406 AC007996.1-201ENST00000620414 2821 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 INTS6P1-201ENST00000504674 2530 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM23P36406 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM23P36406 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM23P36406 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
TRIM23P36406 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM23P36406 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM23P36406 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM23P36406 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM23P36406 ZNF652P1-201ENST00000442420 1309 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM23P36406 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM23P36406 RNA5SP123-201ENST00000363244 119 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 RNA5SP455-201ENST00000365190 119 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TRIM23P36406 MIR937-201ENST00000401271 86 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM23P36406 RBMY2KP-201ENST00000418221 992 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 AC244453.4-201ENST00000419150 388 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 RCC2P2-201ENST00000422174 918 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM23P36406 RHOT1P3-201ENST00000436571 331 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 MTND6P18-201ENST00000439477 513 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 TCEA1P3-201ENST00000443005 880 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 AL645937.3-201ENST00000453647 936 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 HIGD1AP8-201ENST00000453927 274 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM23P36406 RN7SL443P-201ENST00000464331 290 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 MTND3P6-201ENST00000485242 339 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM23P36406 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM23P36406 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM23P36406 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
TRIM23P36406 AP001922.4-201ENST00000526967 290 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TRIM23P36406 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM23P36406 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM23P36406 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
TRIM23P36406 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM23P36406 RN7SL290P-201ENST00000578661 300 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 SNORD39.2-201ENST00000579995 76 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 AC011840.5-201ENST00000582125 771 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM23P36406 AC133552.5-201ENST00000604266 540 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM23P36406 AP003499.2-201ENST00000624100 483 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM23P36406 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM23P36406 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
TRIM23P36406 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM23P36406 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM23P36406 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
TRIM23P36406 AP001642.1-201ENST00000624727 2117 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
TRIM23P36406 Z95327.2-201ENST00000414579 1873 ntBASIC5.05□□□□□ -1.6
TRIM23P36406 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms