Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.12□□□□□ -1.75
COL8A2P25067 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.12□□□□□ -1.75
COL8A2P25067 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL8A2P25067 AC079075.1-201ENST00000559543 878 ntBASIC4.12□□□□□ -1.75
COL8A2P25067 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.12□□□□□ -1.75
COL8A2P25067 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.12□□□□□ -1.75
COL8A2P25067 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.12□□□□□ -1.75
COL8A2P25067 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.12□□□□□ -1.75
COL8A2P25067 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
COL8A2P25067 uc_338.18-201ENST00000615451 175 ntBASIC4.12□□□□□ -1.75
COL8A2P25067 AC244517.3-201ENST00000616254 1235 ntBASIC4.12□□□□□ -1.75
COL8A2P25067 AL022401.1-201ENST00000619498 108 ntBASIC4.12□□□□□ -1.75
COL8A2P25067 AC073869.10-201ENST00000642016 354 ntBASIC4.12□□□□□ -1.75
COL8A2P25067 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.12□□□□□ -1.75
COL8A2P25067 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL8A2P25067 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL8A2P25067 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL8A2P25067 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
COL8A2P25067 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL8A2P25067 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL8A2P25067 TRIM51GP-201ENST00000534741 1350 ntBASIC4.12□□□□□ -1.75
COL8A2P25067 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.12□□□□□ -1.75
COL8A2P25067 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.12□□□□□ -1.75
COL8A2P25067 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.12□□□□□ -1.75
COL8A2P25067 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
COL8A2P25067 TCP1P3-201ENST00000414406 1498 ntBASIC4.11□□□□□ -1.75
COL8A2P25067 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
COL8A2P25067 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
COL8A2P25067 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.11□□□□□ -1.75
COL8A2P25067 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
COL8A2P25067 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.11□□□□□ -1.75
COL8A2P25067 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL8A2P25067 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.11□□□□□ -1.75
COL8A2P25067 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL8A2P25067 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
COL8A2P25067 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL8A2P25067 RNVU1-6-201ENST00000364688 164 ntBASIC4.11□□□□□ -1.75
COL8A2P25067 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
COL8A2P25067 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
COL8A2P25067 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.11□□□□□ -1.75
COL8A2P25067 HSPE1P16-201ENST00000426640 348 ntBASIC4.11□□□□□ -1.75
COL8A2P25067 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.11□□□□□ -1.75
COL8A2P25067 NRBF2P3-201ENST00000432731 865 ntBASIC4.11□□□□□ -1.75
COL8A2P25067 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.11□□□□□ -1.75
COL8A2P25067 AC073052.1-201ENST00000440417 714 ntBASIC4.11□□□□□ -1.75
COL8A2P25067 RPL36AP15-201ENST00000444514 266 ntBASIC4.11□□□□□ -1.75
COL8A2P25067 AC000111.2-201ENST00000448200 210 ntBASIC4.11□□□□□ -1.75
COL8A2P25067 RN7SL738P-201ENST00000470264 297 ntBASIC4.11□□□□□ -1.75
COL8A2P25067 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.11□□□□□ -1.75
COL8A2P25067 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL8A2P25067 AC116562.1-201ENST00000485355 781 ntBASIC4.11□□□□□ -1.75
COL8A2P25067 SUMO2P4-201ENST00000504193 276 ntBASIC4.11□□□□□ -1.75
COL8A2P25067 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.11□□□□□ -1.75
COL8A2P25067 LDHBP3-201ENST00000514909 822 ntBASIC4.11□□□□□ -1.75
COL8A2P25067 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.11□□□□□ -1.75
COL8A2P25067 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.11□□□□□ -1.75
COL8A2P25067 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.11□□□□□ -1.75
COL8A2P25067 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.11□□□□□ -1.75
COL8A2P25067 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL8A2P25067 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.11□□□□□ -1.75
COL8A2P25067 AC063949.1-201ENST00000552900 865 ntBASIC4.11□□□□□ -1.75
COL8A2P25067 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.11□□□□□ -1.75
COL8A2P25067 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
COL8A2P25067 AL390726.5-202ENST00000564800 256 ntBASIC4.11□□□□□ -1.75
COL8A2P25067 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.11□□□□□ -1.75
COL8A2P25067 DPRXP4-201ENST00000578053 568 ntBASIC4.11□□□□□ -1.75
COL8A2P25067 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.11□□□□□ -1.75
COL8A2P25067 AL512782.1-201ENST00000603093 364 ntBASIC4.11□□□□□ -1.75
COL8A2P25067 AL133406.3-201ENST00000606817 541 ntBASIC4.11□□□□□ -1.75
COL8A2P25067 AC010424.2-201ENST00000607594 443 ntBASIC4.11□□□□□ -1.75
COL8A2P25067 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.11□□□□□ -1.75
COL8A2P25067 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
COL8A2P25067 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
COL8A2P25067 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
COL8A2P25067 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.11□□□□□ -1.75
COL8A2P25067 Z95331.1-201ENST00000623075 23112 ntBASIC4.11□□□□□ -1.75
COL8A2P25067 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
COL8A2P25067 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
COL8A2P25067 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
COL8A2P25067 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.11□□□□□ -1.75
COL8A2P25067 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL8A2P25067 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
COL8A2P25067 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
COL8A2P25067 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL8A2P25067 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
COL8A2P25067 AL022393.1-201ENST00000625142 1677 ntBASIC4.1□□□□□ -1.75
COL8A2P25067 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL8A2P25067 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.1□□□□□ -1.75
COL8A2P25067 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
COL8A2P25067 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL8A2P25067 SNORA73.1-201ENST00000363107 205 ntBASIC4.1□□□□□ -1.75
COL8A2P25067 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL8A2P25067 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
COL8A2P25067 RPL21P67-201ENST00000402896 478 ntBASIC4.1□□□□□ -1.75
COL8A2P25067 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.1□□□□□ -1.75
COL8A2P25067 RNU2-50P-201ENST00000410494 143 ntBASIC4.1□□□□□ -1.75
COL8A2P25067 RNA5SP345-201ENST00000410646 108 ntBASIC4.1□□□□□ -1.75
COL8A2P25067 AL590139.1-201ENST00000416267 400 ntBASIC4.1□□□□□ -1.75
COL8A2P25067 AC019050.1-201ENST00000418508 492 ntBASIC4.1□□□□□ -1.75
COL8A2P25067 AC013429.2-201ENST00000418798 781 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms