Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 AC138409.2-202ENST00000507274 458 ntBASIC8.47□□□□□ -1.05
PTPREP23469 AC008496.1-201ENST00000509131 295 ntBASIC8.47□□□□□ -1.05
PTPREP23469 RNA5SP216-201ENST00000516111 123 ntBASIC8.47□□□□□ -1.05
PTPREP23469 RNU6-1314P-201ENST00000517139 104 ntBASIC8.47□□□□□ -1.05
PTPREP23469 RPS20-202ENST00000518875 671 ntTSL 2 BASIC8.47□□□□□ -1.05
PTPREP23469 AC131935.1-201ENST00000524621 333 ntBASIC8.47□□□□□ -1.05
PTPREP23469 PSMA2P1-201ENST00000526365 646 ntBASIC8.47□□□□□ -1.05
PTPREP23469 AP000889.2-201ENST00000532684 490 ntBASIC8.47□□□□□ -1.05
PTPREP23469 AC027544.3-201ENST00000535082 757 ntBASIC8.47□□□□□ -1.05
PTPREP23469 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC8.47□□□□□ -1.05
PTPREP23469 AL163153.1-201ENST00000554223 283 ntBASIC8.47□□□□□ -1.05
PTPREP23469 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC8.47□□□□□ -1.05
PTPREP23469 AC026464.5-201ENST00000562497 722 ntBASIC8.47□□□□□ -1.05
PTPREP23469 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC8.47□□□□□ -1.05
PTPREP23469 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PTPREP23469 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC8.47□□□□□ -1.05
PTPREP23469 NQO2-209ENST00000606474 470 ntTSL 3 BASIC8.47□□□□□ -1.05
PTPREP23469 AC022893.3-201ENST00000607665 437 ntBASIC8.47□□□□□ -1.05
PTPREP23469 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC8.47□□□□□ -1.05
PTPREP23469 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC8.47□□□□□ -1.05
PTPREP23469 SRP54-214ENST00000630962 162 ntTSL 5 BASIC8.47□□□□□ -1.05
PTPREP23469 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PTPREP23469 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC8.47□□□□□ -1.05
PTPREP23469 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PTPREP23469 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PTPREP23469 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
PTPREP23469 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PTPREP23469 APP-206ENST00000359726 3294 ntTSL 2 BASIC8.47□□□□□ -1.05
PTPREP23469 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
PTPREP23469 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PTPREP23469 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC8.47□□□□□ -1.05
PTPREP23469 ARHGAP42P4-201ENST00000549782 2934 ntBASIC8.47□□□□□ -1.05
PTPREP23469 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC8.46□□□□□ -1.05
PTPREP23469 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
PTPREP23469 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
PTPREP23469 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
PTPREP23469 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC8.46□□□□□ -1.05
PTPREP23469 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PTPREP23469 MGP-201ENST00000228938 694 ntTSL 3 BASIC8.46□□□□□ -1.06
PTPREP23469 AC117470.1-201ENST00000381974 330 ntBASIC8.46□□□□□ -1.06
PTPREP23469 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
PTPREP23469 U3.23-201ENST00000391132 200 ntBASIC8.46□□□□□ -1.06
PTPREP23469 RPS4XP8-201ENST00000402039 771 ntBASIC8.46□□□□□ -1.06
PTPREP23469 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC8.46□□□□□ -1.06
PTPREP23469 AL589872.1-201ENST00000426602 288 ntBASIC8.46□□□□□ -1.06
PTPREP23469 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC8.46□□□□□ -1.06
PTPREP23469 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
PTPREP23469 CBX1P1-201ENST00000440184 427 ntBASIC8.46□□□□□ -1.06
PTPREP23469 AC104306.1-201ENST00000449702 371 ntBASIC8.46□□□□□ -1.06
PTPREP23469 AC103563.5-201ENST00000455643 364 ntBASIC8.46□□□□□ -1.06
PTPREP23469 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC8.46□□□□□ -1.06
PTPREP23469 SNORA25.17-201ENST00000517184 124 ntBASIC8.46□□□□□ -1.06
PTPREP23469 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC8.46□□□□□ -1.06
PTPREP23469 PTP4A1P6-201ENST00000531034 478 ntBASIC8.46□□□□□ -1.06
PTPREP23469 AP002404.1-201ENST00000532005 451 ntBASIC8.46□□□□□ -1.06
PTPREP23469 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC8.46□□□□□ -1.06
PTPREP23469 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC8.46□□□□□ -1.06
PTPREP23469 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC8.46□□□□□ -1.06
PTPREP23469 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC8.46□□□□□ -1.06
PTPREP23469 MIR4680-201ENST00000580906 66 ntBASIC8.46□□□□□ -1.06
PTPREP23469 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC8.46□□□□□ -1.06
PTPREP23469 CKS1BP3-201ENST00000600888 237 ntBASIC8.46□□□□□ -1.06
PTPREP23469 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC8.46□□□□□ -1.06
PTPREP23469 AL451049.1-201ENST00000608672 497 ntBASIC8.46□□□□□ -1.06
PTPREP23469 HOTTIP_2.1-201ENST00000616633 376 ntBASIC8.46□□□□□ -1.06
PTPREP23469 AC090510.2-201ENST00000617465 629 ntBASIC8.46□□□□□ -1.06
PTPREP23469 AC012629.3-201ENST00000623397 328 ntBASIC8.46□□□□□ -1.06
PTPREP23469 AC005618.4-201ENST00000625053 554 ntBASIC8.46□□□□□ -1.06
PTPREP23469 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PTPREP23469 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.06
PTPREP23469 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PTPREP23469 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC8.46□□□□□ -1.06
PTPREP23469 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PTPREP23469 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PTPREP23469 AC124045.1-201ENST00000606008 1953 ntBASIC8.46□□□□□ -1.06
PTPREP23469 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PTPREP23469 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
PTPREP23469 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
PTPREP23469 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PTPREP23469 AC093616.1-201ENST00000427434 2095 ntBASIC8.45□□□□□ -1.06
PTPREP23469 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PTPREP23469 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
PTPREP23469 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
PTPREP23469 BTK-202ENST00000372880 2248 ntTSL 2 BASIC8.45□□□□□ -1.06
PTPREP23469 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
PTPREP23469 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PTPREP23469 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PTPREP23469 AL023806.3-201ENST00000638502 2704 ntBASIC8.45□□□□□ -1.06
PTPREP23469 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PTPREP23469 GAPDHP24-201ENST00000328713 983 ntBASIC8.45□□□□□ -1.06
PTPREP23469 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
PTPREP23469 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
PTPREP23469 RN7SKP118-201ENST00000364331 330 ntBASIC8.45□□□□□ -1.06
PTPREP23469 RNU12-2P-201ENST00000364789 156 ntBASIC8.45□□□□□ -1.06
PTPREP23469 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
PTPREP23469 MIR551B-201ENST00000384984 96 ntBASIC8.45□□□□□ -1.06
PTPREP23469 RNU1-56P-201ENST00000391303 164 ntBASIC8.45□□□□□ -1.06
PTPREP23469 OFD1P1Y-201ENST00000411756 1225 ntBASIC8.45□□□□□ -1.06
PTPREP23469 AC062016.2-201ENST00000420950 676 ntBASIC8.45□□□□□ -1.06
PTPREP23469 HCG25-217ENST00000422366 702 ntTSL 3 BASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms