Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.37□□□□□ -1.55
COL11A1P12107 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL11A1P12107 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC5.37□□□□□ -1.55
COL11A1P12107 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL11A1P12107 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL11A1P12107 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
COL11A1P12107 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL11A1P12107 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL11A1P12107 AC093671.1-201ENST00000624981 2929 ntBASIC5.37□□□□□ -1.55
COL11A1P12107 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL11A1P12107 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
COL11A1P12107 CKS1BP6-201ENST00000424932 240 ntBASIC5.37□□□□□ -1.55
COL11A1P12107 RPL23AP93-201ENST00000440847 484 ntBASIC5.37□□□□□ -1.55
COL11A1P12107 MRPL35P2-201ENST00000448009 511 ntBASIC5.37□□□□□ -1.55
COL11A1P12107 MTND2P28-201ENST00000457540 1044 ntBASIC5.37□□□□□ -1.55
COL11A1P12107 RPL7AP52-201ENST00000458096 790 ntBASIC5.37□□□□□ -1.55
COL11A1P12107 AC245028.2-201ENST00000458673 253 ntBASIC5.37□□□□□ -1.55
COL11A1P12107 AC010326.1-201ENST00000462726 602 ntBASIC5.37□□□□□ -1.55
COL11A1P12107 AC021660.1-201ENST00000465006 554 ntBASIC5.37□□□□□ -1.55
COL11A1P12107 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
COL11A1P12107 RN7SL558P-201ENST00000497468 299 ntBASIC5.37□□□□□ -1.55
COL11A1P12107 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.37□□□□□ -1.55
COL11A1P12107 IGLVIV-65-201ENST00000517313 360 ntBASIC5.37□□□□□ -1.55
COL11A1P12107 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.37□□□□□ -1.55
COL11A1P12107 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.37□□□□□ -1.55
COL11A1P12107 MIR3138-201ENST00000585238 82 ntBASIC5.37□□□□□ -1.55
COL11A1P12107 AC006453.5-201ENST00000636451 619 ntBASIC5.37□□□□□ -1.55
COL11A1P12107 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.36□□□□□ -1.55
COL11A1P12107 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.36□□□□□ -1.55
COL11A1P12107 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.36□□□□□ -1.55
COL11A1P12107 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL11A1P12107 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.36□□□□□ -1.55
COL11A1P12107 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
COL11A1P12107 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL11A1P12107 RAD17P1-201ENST00000418130 2042 ntBASIC5.36□□□□□ -1.55
COL11A1P12107 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL11A1P12107 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.36□□□□□ -1.55
COL11A1P12107 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
COL11A1P12107 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL11A1P12107 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL11A1P12107 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
COL11A1P12107 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.36□□□□□ -1.55
COL11A1P12107 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL11A1P12107 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL11A1P12107 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL11A1P12107 AC008033.1-201ENST00000216407 1162 ntBASIC5.36□□□□□ -1.55
COL11A1P12107 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
COL11A1P12107 AC013429.2-201ENST00000418798 781 ntBASIC5.36□□□□□ -1.55
COL11A1P12107 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.36□□□□□ -1.55
COL11A1P12107 AC093815.1-201ENST00000508637 280 ntBASIC5.36□□□□□ -1.55
COL11A1P12107 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.36□□□□□ -1.55
COL11A1P12107 AC020937.1-201ENST00000519677 1013 ntBASIC5.36□□□□□ -1.55
COL11A1P12107 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.36□□□□□ -1.55
COL11A1P12107 NPM1P5-201ENST00000557228 838 ntBASIC5.36□□□□□ -1.55
COL11A1P12107 MIR3939-201ENST00000582614 106 ntBASIC5.36□□□□□ -1.55
COL11A1P12107 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.36□□□□□ -1.55
COL11A1P12107 AL445423.1-201ENST00000609941 536 ntBASIC5.36□□□□□ -1.55
COL11A1P12107 AC012409.3-201ENST00000611343 981 ntBASIC5.36□□□□□ -1.55
COL11A1P12107 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.36□□□□□ -1.55
COL11A1P12107 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL11A1P12107 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL11A1P12107 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.36□□□□□ -1.55
COL11A1P12107 DHX9P1-201ENST00000436565 3076 ntBASIC5.36□□□□□ -1.55
COL11A1P12107 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
COL11A1P12107 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
COL11A1P12107 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.36□□□□□ -1.55
COL11A1P12107 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL11A1P12107 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL11A1P12107 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL11A1P12107 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.35□□□□□ -1.55
COL11A1P12107 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.35□□□□□ -1.55
COL11A1P12107 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL11A1P12107 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL11A1P12107 OR4K17-201ENST00000315543 1032 ntBASIC5.35□□□□□ -1.55
COL11A1P12107 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL11A1P12107 RNU1-130P-201ENST00000363930 160 ntBASIC5.35□□□□□ -1.55
COL11A1P12107 AC007738.1-201ENST00000413892 348 ntBASIC5.35□□□□□ -1.55
COL11A1P12107 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.35□□□□□ -1.55
COL11A1P12107 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.35□□□□□ -1.55
COL11A1P12107 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.35□□□□□ -1.55
COL11A1P12107 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL11A1P12107 AC005868.1-201ENST00000536421 331 ntBASIC5.35□□□□□ -1.55
COL11A1P12107 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.35□□□□□ -1.55
COL11A1P12107 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.35□□□□□ -1.55
COL11A1P12107 PARP1P2-201ENST00000556806 195 ntBASIC5.35□□□□□ -1.55
COL11A1P12107 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL11A1P12107 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL11A1P12107 VN2R3P-201ENST00000422626 1412 ntBASIC5.35□□□□□ -1.55
COL11A1P12107 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
COL11A1P12107 AC120338.1-201ENST00000625074 1541 ntBASIC5.35□□□□□ -1.55
COL11A1P12107 AC090017.1-201ENST00000548612 1779 ntBASIC5.35□□□□□ -1.55
COL11A1P12107 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL11A1P12107 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
COL11A1P12107 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL11A1P12107 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL11A1P12107 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
COL11A1P12107 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
COL11A1P12107 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
COL11A1P12107 AC009506.2-201ENST00000420635 840 ntBASIC5.34□□□□□ -1.55
COL11A1P12107 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms