Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC6.78□□□□□ -1.32
HMGB1P09429 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.32
HMGB1P09429 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.77□□□□□ -1.32
HMGB1P09429 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HMGB1P09429 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HMGB1P09429 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
HMGB1P09429 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
HMGB1P09429 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
HMGB1P09429 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.77□□□□□ -1.33
HMGB1P09429 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HMGB1P09429 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
HMGB1P09429 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
HMGB1P09429 OR52B1P-201ENST00000316506 909 ntBASIC6.77□□□□□ -1.33
HMGB1P09429 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HMGB1P09429 RNU6-354P-201ENST00000383862 107 ntBASIC6.77□□□□□ -1.33
HMGB1P09429 RNU6-610P-201ENST00000384264 107 ntBASIC6.77□□□□□ -1.33
HMGB1P09429 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HMGB1P09429 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
HMGB1P09429 DNAJC19P6-201ENST00000401853 280 ntBASIC6.77□□□□□ -1.33
HMGB1P09429 VN1R12P-201ENST00000403778 876 ntBASIC6.77□□□□□ -1.33
HMGB1P09429 PRRC2CP1-201ENST00000404428 159 ntBASIC6.77□□□□□ -1.33
HMGB1P09429 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.77□□□□□ -1.33
HMGB1P09429 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.77□□□□□ -1.33
HMGB1P09429 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.77□□□□□ -1.33
HMGB1P09429 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.77□□□□□ -1.33
HMGB1P09429 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC6.77□□□□□ -1.33
HMGB1P09429 SNORD125-201ENST00000459538 96 ntBASIC6.77□□□□□ -1.33
HMGB1P09429 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HMGB1P09429 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC6.77□□□□□ -1.33
HMGB1P09429 DUTP1-201ENST00000493631 470 ntBASIC6.77□□□□□ -1.33
HMGB1P09429 HMGB1P21-201ENST00000502313 581 ntBASIC6.77□□□□□ -1.33
HMGB1P09429 AC016550.1-201ENST00000505348 785 ntBASIC6.77□□□□□ -1.33
HMGB1P09429 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.77□□□□□ -1.33
HMGB1P09429 AC005351.1-201ENST00000511152 786 ntBASIC6.77□□□□□ -1.33
HMGB1P09429 RN7SKP70-201ENST00000516655 271 ntBASIC6.77□□□□□ -1.33
HMGB1P09429 SCARNA6.1-201ENST00000516989 238 ntBASIC6.77□□□□□ -1.33
HMGB1P09429 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
HMGB1P09429 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC6.77□□□□□ -1.33
HMGB1P09429 OR8Q1P-201ENST00000526467 655 ntBASIC6.77□□□□□ -1.33
HMGB1P09429 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC6.77□□□□□ -1.33
HMGB1P09429 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.77□□□□□ -1.33
HMGB1P09429 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.77□□□□□ -1.33
HMGB1P09429 SERPINE4P-201ENST00000554978 281 ntBASIC6.77□□□□□ -1.33
HMGB1P09429 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC6.77□□□□□ -1.33
HMGB1P09429 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC6.77□□□□□ -1.33
HMGB1P09429 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC6.77□□□□□ -1.33
HMGB1P09429 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC6.77□□□□□ -1.33
HMGB1P09429 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC6.77□□□□□ -1.33
HMGB1P09429 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.77□□□□□ -1.33
HMGB1P09429 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.77□□□□□ -1.33
HMGB1P09429 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.77□□□□□ -1.33
HMGB1P09429 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.77□□□□□ -1.33
HMGB1P09429 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.77□□□□□ -1.33
HMGB1P09429 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.77□□□□□ -1.33
HMGB1P09429 AC020978.9-201ENST00000624380 1141 ntBASIC6.77□□□□□ -1.33
HMGB1P09429 AP000720.1-201ENST00000625091 483 ntBASIC6.77□□□□□ -1.33
HMGB1P09429 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC6.77□□□□□ -1.33
HMGB1P09429 OR8G3P-202ENST00000641572 1255 ntBASIC6.77□□□□□ -1.33
HMGB1P09429 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HMGB1P09429 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HMGB1P09429 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
HMGB1P09429 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HMGB1P09429 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
HMGB1P09429 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HMGB1P09429 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HMGB1P09429 AC004076.2-201ENST00000620532 3323 ntBASIC6.76□□□□□ -1.33
HMGB1P09429 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.76□□□□□ -1.33
HMGB1P09429 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.76□□□□□ -1.33
HMGB1P09429 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.76□□□□□ -1.33
HMGB1P09429 AC090229.1-201ENST00000590983 1609 ntBASIC6.76□□□□□ -1.33
HMGB1P09429 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.76□□□□□ -1.33
HMGB1P09429 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HMGB1P09429 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
HMGB1P09429 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC6.76□□□□□ -1.33
HMGB1P09429 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
HMGB1P09429 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC6.76□□□□□ -1.33
HMGB1P09429 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HMGB1P09429 AL159987.1-201ENST00000347911 293 ntBASIC6.76□□□□□ -1.33
HMGB1P09429 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.76□□□□□ -1.33
HMGB1P09429 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HMGB1P09429 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.76□□□□□ -1.33
HMGB1P09429 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HMGB1P09429 AC066692.1-201ENST00000421721 457 ntBASIC6.76□□□□□ -1.33
HMGB1P09429 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.76□□□□□ -1.33
HMGB1P09429 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC6.76□□□□□ -1.33
HMGB1P09429 AL022331.1-201ENST00000429025 477 ntBASIC6.76□□□□□ -1.33
HMGB1P09429 TRAPPC2P9-201ENST00000434556 343 ntBASIC6.76□□□□□ -1.33
HMGB1P09429 HMGB1P45-201ENST00000435986 653 ntBASIC6.76□□□□□ -1.33
HMGB1P09429 RPL5P10-201ENST00000445207 894 ntBASIC6.76□□□□□ -1.33
HMGB1P09429 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.76□□□□□ -1.33
HMGB1P09429 AC008280.2-201ENST00000455473 307 ntBASIC6.76□□□□□ -1.33
HMGB1P09429 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC6.76□□□□□ -1.33
HMGB1P09429 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HMGB1P09429 RPL7P6-201ENST00000480903 738 ntBASIC6.76□□□□□ -1.33
HMGB1P09429 RN7SL741P-201ENST00000482473 289 ntBASIC6.76□□□□□ -1.33
HMGB1P09429 AC092902.1-201ENST00000486999 259 ntBASIC6.76□□□□□ -1.33
HMGB1P09429 AC009120.1-201ENST00000493458 473 ntBASIC6.76□□□□□ -1.33
HMGB1P09429 NENFP3-201ENST00000503735 313 ntBASIC6.76□□□□□ -1.33
HMGB1P09429 HPRT1P2-201ENST00000505250 544 ntBASIC6.76□□□□□ -1.33
HMGB1P09429 AC090071.1-201ENST00000507713 644 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms