Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC107068.1-201ENST00000563286 4218 ntBASIC4.83□□□□□ -1.64
HLA-DQB2P05538 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DQB2P05538 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DQB2P05538 AC007382.1-201ENST00000624376 2618 ntBASIC4.83□□□□□ -1.64
HLA-DQB2P05538 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DQB2P05538 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HLA-DQB2P05538 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
HLA-DQB2P05538 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DQB2P05538 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 AL590762.2-201ENST00000395798 571 ntBASIC4.82□□□□□ -1.64
HLA-DQB2P05538 RN7SKP100-201ENST00000411258 284 ntBASIC4.82□□□□□ -1.64
HLA-DQB2P05538 NRBF2P3-201ENST00000432731 865 ntBASIC4.82□□□□□ -1.64
HLA-DQB2P05538 AC008072.1-201ENST00000434254 824 ntBASIC4.82□□□□□ -1.64
HLA-DQB2P05538 NMNAT1P2-201ENST00000435192 860 ntBASIC4.82□□□□□ -1.64
HLA-DQB2P05538 CYCSP11-201ENST00000436426 315 ntBASIC4.82□□□□□ -1.64
HLA-DQB2P05538 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 AC091685.2-201ENST00000454924 864 ntBASIC4.82□□□□□ -1.64
HLA-DQB2P05538 AC008410.1-201ENST00000483777 339 ntBASIC4.82□□□□□ -1.64
HLA-DQB2P05538 AC073358.1-201ENST00000505671 684 ntBASIC4.82□□□□□ -1.64
HLA-DQB2P05538 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 RNU1-6P-201ENST00000516290 144 ntBASIC4.82□□□□□ -1.64
HLA-DQB2P05538 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 OR8A2P-201ENST00000528631 952 ntBASIC4.82□□□□□ -1.64
HLA-DQB2P05538 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 RN7SL435P-201ENST00000584418 282 ntBASIC4.82□□□□□ -1.64
HLA-DQB2P05538 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 AC005084.1-201ENST00000605160 304 ntBASIC4.82□□□□□ -1.64
HLA-DQB2P05538 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 AL359922.3-201ENST00000624779 1670 ntBASIC4.82□□□□□ -1.64
HLA-DQB2P05538 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQB2P05538 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQB2P05538 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQB2P05538 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQB2P05538 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HLA-DQB2P05538 AP000580.1-201ENST00000404439 358 ntBASIC4.81□□□□□ -1.64
HLA-DQB2P05538 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DQB2P05538 FABP7P1-201ENST00000424004 391 ntBASIC4.81□□□□□ -1.64
HLA-DQB2P05538 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DQB2P05538 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DQB2P05538 TDGF1P1-201ENST00000445734 527 ntBASIC4.81□□□□□ -1.64
HLA-DQB2P05538 IGLV2-34-201ENST00000490007 283 ntBASIC4.81□□□□□ -1.64
HLA-DQB2P05538 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DQB2P05538 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DQB2P05538 OR7H2P-201ENST00000513483 306 ntBASIC4.81□□□□□ -1.64
HLA-DQB2P05538 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DQB2P05538 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DQB2P05538 AC105129.1-201ENST00000560250 297 ntBASIC4.81□□□□□ -1.64
HLA-DQB2P05538 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DQB2P05538 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
HLA-DQB2P05538 MIR4737-201ENST00000583979 81 ntBASIC4.81□□□□□ -1.64
HLA-DQB2P05538 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DQB2P05538 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DQB2P05538 AL512782.1-201ENST00000603093 364 ntBASIC4.81□□□□□ -1.64
HLA-DQB2P05538 FAM25E-202ENST00000608562 189 ntBASIC4.81□□□□□ -1.64
HLA-DQB2P05538 MIR8069-1-201ENST00000616627 86 ntBASIC4.81□□□□□ -1.64
HLA-DQB2P05538 MIR8069-2-201ENST00000621412 86 ntBASIC4.81□□□□□ -1.64
HLA-DQB2P05538 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DQB2P05538 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQB2P05538 AL132656.3-201ENST00000606384 1595 ntBASIC4.81□□□□□ -1.64
HLA-DQB2P05538 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DQB2P05538 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DQB2P05538 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQB2P05538 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DQB2P05538 AL672167.1-205ENST00000641112 3080 ntBASIC4.81□□□□□ -1.64
HLA-DQB2P05538 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DQB2P05538 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 MTND5P12-201ENST00000502851 1449 ntBASIC4.8□□□□□ -1.64
HLA-DQB2P05538 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 MIR550A3-201ENST00000390735 95 ntBASIC4.8□□□□□ -1.64
HLA-DQB2P05538 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms