Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.74□□□□□ -1.65
MT-ND1P03886 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
MT-ND1P03886 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
MT-ND1P03886 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
MT-ND1P03886 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MT-ND1P03886 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
MT-ND1P03886 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
MT-ND1P03886 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
MT-ND1P03886 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MT-ND1P03886 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
MT-ND1P03886 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MT-ND1P03886 SNORA2.3-201ENST00000383920 135 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 RNA5SP339-201ENST00000390987 122 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 AL031985.1-201ENST00000392713 418 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.73□□□□□ -1.65
MT-ND1P03886 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.73□□□□□ -1.65
MT-ND1P03886 RN7SKP293-201ENST00000411389 296 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.73□□□□□ -1.65
MT-ND1P03886 USP9YP19-201ENST00000412165 485 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 AL133325.1-201ENST00000421090 382 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 GAPDHP34-201ENST00000432112 823 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.73□□□□□ -1.65
MT-ND1P03886 ARL5AP3-201ENST00000439327 386 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 CALM1P2-201ENST00000452941 448 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 AC089999.1-201ENST00000460336 374 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.73□□□□□ -1.65
MT-ND1P03886 AC073073.1-201ENST00000493920 463 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.73□□□□□ -1.65
MT-ND1P03886 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.73□□□□□ -1.65
MT-ND1P03886 RPEP1-201ENST00000504507 658 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 RPL23AP53-201ENST00000521854 457 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.73□□□□□ -1.65
MT-ND1P03886 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.73□□□□□ -1.65
MT-ND1P03886 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.73□□□□□ -1.65
MT-ND1P03886 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.73□□□□□ -1.65
MT-ND1P03886 AL049830.4-201ENST00000555149 351 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 AC009268.1-201ENST00000561352 1203 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.73□□□□□ -1.65
MT-ND1P03886 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.73□□□□□ -1.65
MT-ND1P03886 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
MT-ND1P03886 AC233702.9-201ENST00000581528 203 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 BMS1P7-201ENST00000602440 1052 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 AC084373.1-201ENST00000603311 235 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 AC005229.3-201ENST00000603438 323 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 SUGT1P3-202ENST00000604259 383 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 AP005432.2-201ENST00000608162 586 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 MIR8069-1-201ENST00000616627 86 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 AC126175.1-201ENST00000617041 758 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.73□□□□□ -1.65
MT-ND1P03886 MIR8069-2-201ENST00000621412 86 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
MT-ND1P03886 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
MT-ND1P03886 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.73□□□□□ -1.65
MT-ND1P03886 CASC19-221ENST00000641309 1382 ntBASIC4.73□□□□□ -1.65
MT-ND1P03886 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MT-ND1P03886 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.73□□□□□ -1.65
MT-ND1P03886 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MT-ND1P03886 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MT-ND1P03886 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.73□□□□□ -1.65
MT-ND1P03886 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.73□□□□□ -1.65
MT-ND1P03886 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.73□□□□□ -1.65
MT-ND1P03886 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
MT-ND1P03886 PANDAR-201ENST00000629595 1506 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
MT-ND1P03886 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
MT-ND1P03886 AC083843.2-201ENST00000568248 6253 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
MT-ND1P03886 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
MT-ND1P03886 U3.3-201ENST00000362986 216 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 RNU6-819P-201ENST00000364116 107 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 RNU1-77P-201ENST00000390868 162 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 RNU1-149P-201ENST00000390870 161 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 ST13P16-201ENST00000401760 781 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 AL390774.1-201ENST00000411924 246 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.72□□□□□ -1.65
MT-ND1P03886 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.72□□□□□ -1.65
MT-ND1P03886 OR6K4P-201ENST00000423179 955 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 EI24P4-201ENST00000423683 1078 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.72□□□□□ -1.65
MT-ND1P03886 MTND2P2-201ENST00000434633 945 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 CYCSP12-201ENST00000437729 300 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 SCAND3P1-201ENST00000439854 1060 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 AC073052.1-201ENST00000440417 714 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 TXNP5-201ENST00000441043 315 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.72□□□□□ -1.65
MT-ND1P03886 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 AL500527.1-201ENST00000448532 255 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 AL591623.2-201ENST00000449978 222 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 AL691482.1-201ENST00000453255 87 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 GYG1P1-201ENST00000460864 698 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 PPIAP19-201ENST00000486414 492 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 ENPP7P9-201ENST00000514456 627 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 RNA5SP464-201ENST00000516251 108 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.72□□□□□ -1.65
MT-ND1P03886 IGHV3-63-201ENST00000518422 341 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 AC012400.1-201ENST00000518452 381 ntBASIC4.72□□□□□ -1.65
MT-ND1P03886 OR7E10P-201ENST00000526420 991 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms