Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC092162.3-201ENST00000624511 1624 ntBASIC2.07□□□□□ -2.08
USH2AO75445 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC2.07□□□□□ -2.08
USH2AO75445 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
USH2AO75445 RAB9AP3-201ENST00000412737 573 ntBASIC2.07□□□□□ -2.08
USH2AO75445 RAB9AP1-201ENST00000449393 573 ntBASIC2.07□□□□□ -2.08
USH2AO75445 ALG13-211ENST00000473389 693 ntTSL 2 BASIC2.07□□□□□ -2.08
USH2AO75445 TVP23BP1-201ENST00000557500 617 ntBASIC2.07□□□□□ -2.08
USH2AO75445 AC090515.3-201ENST00000560431 315 ntBASIC2.07□□□□□ -2.08
USH2AO75445 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.07□□□□□ -2.08
USH2AO75445 IPO5P1-202ENST00000600039 287 ntBASIC2.07□□□□□ -2.08
USH2AO75445 RNU4-89P-201ENST00000607443 133 ntBASIC2.07□□□□□ -2.08
USH2AO75445 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
USH2AO75445 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC2.07□□□□□ -2.08
USH2AO75445 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC2.07□□□□□ -2.08
USH2AO75445 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC2.07□□□□□ -2.08
USH2AO75445 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
USH2AO75445 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC2.07□□□□□ -2.08
USH2AO75445 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
USH2AO75445 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC2.07□□□□□ -2.08
USH2AO75445 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC2.07□□□□□ -2.08
USH2AO75445 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC2.06□□□□□ -2.08
USH2AO75445 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 FN1-206ENST00000359671 8524 ntTSL 5 BASIC2.06□□□□□ -2.08
USH2AO75445 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
USH2AO75445 CCL7-202ENST00000394627 696 ntTSL 3 BASIC2.06□□□□□ -2.08
USH2AO75445 SYF2P2-201ENST00000417620 583 ntBASIC2.06□□□□□ -2.08
USH2AO75445 MRPL50P1-201ENST00000431951 384 ntBASIC2.06□□□□□ -2.08
USH2AO75445 HMGN2P31-201ENST00000432430 273 ntBASIC2.06□□□□□ -2.08
USH2AO75445 AC105137.1-201ENST00000484355 562 ntBASIC2.06□□□□□ -2.08
USH2AO75445 RPL7P41-201ENST00000485823 957 ntBASIC2.06□□□□□ -2.08
USH2AO75445 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC2.06□□□□□ -2.08
USH2AO75445 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
USH2AO75445 AL161729.3-201ENST00000603533 673 ntBASIC2.06□□□□□ -2.08
USH2AO75445 SNORD91A-202ENST00000609620 191 ntBASIC2.06□□□□□ -2.08
USH2AO75445 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.06□□□□□ -2.08
USH2AO75445 TLK1P1-201ENST00000456760 2440 ntBASIC2.06□□□□□ -2.08
USH2AO75445 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC2.06□□□□□ -2.08
USH2AO75445 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
USH2AO75445 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
USH2AO75445 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC2.06□□□□□ -2.08
USH2AO75445 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC2.06□□□□□ -2.08
USH2AO75445 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
USH2AO75445 SNORA48.2-201ENST00000390926 124 ntBASIC2.06□□□□□ -2.08
USH2AO75445 AL133244.1-201ENST00000456007 258 ntBASIC2.06□□□□□ -2.08
USH2AO75445 AP000827.1-201ENST00000527814 258 ntBASIC2.06□□□□□ -2.08
USH2AO75445 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
USH2AO75445 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 ARL4AP5-201ENST00000404372 599 ntBASIC2.06□□□□□ -2.08
USH2AO75445 AC011933.1-201ENST00000413334 321 ntBASIC2.06□□□□□ -2.08
USH2AO75445 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC2.06□□□□□ -2.08
USH2AO75445 WBP1LP4-201ENST00000505043 344 ntBASIC2.06□□□□□ -2.08
USH2AO75445 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.06□□□□□ -2.08
USH2AO75445 RPL7L1P13-201ENST00000511702 739 ntBASIC2.06□□□□□ -2.08
USH2AO75445 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC2.06□□□□□ -2.08
USH2AO75445 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC2.06□□□□□ -2.08
USH2AO75445 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC2.06□□□□□ -2.08
USH2AO75445 RN7SL290P-201ENST00000578661 300 ntBASIC2.06□□□□□ -2.08
USH2AO75445 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.06□□□□□ -2.08
USH2AO75445 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.06□□□□□ -2.08
USH2AO75445 FAM27B-201ENST00000610601 213 ntBASIC2.06□□□□□ -2.08
USH2AO75445 MAPK10-320ENST00000641462 6696 ntBASIC2.06□□□□□ -2.08
USH2AO75445 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC2.06□□□□□ -2.08
USH2AO75445 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC2.06□□□□□ -2.08
USH2AO75445 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
USH2AO75445 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 KIAA1671-203ENST00000406486 7864 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
USH2AO75445 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC2.06□□□□□ -2.08
USH2AO75445 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 GRIK3-201ENST00000373091 9101 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms