Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PROM1O43490 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PROM1O43490 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PROM1O43490 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PROM1O43490 AC093775.1-201ENST00000624154 1868 ntBASIC5.56□□□□□ -1.52
PROM1O43490 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PROM1O43490 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PROM1O43490 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PROM1O43490 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PROM1O43490 RNU6-31P-201ENST00000384388 108 ntBASIC5.56□□□□□ -1.52
PROM1O43490 SFR1P1-201ENST00000403720 688 ntBASIC5.56□□□□□ -1.52
PROM1O43490 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.56□□□□□ -1.52
PROM1O43490 RPL26P37-201ENST00000411983 438 ntBASIC5.56□□□□□ -1.52
PROM1O43490 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.56□□□□□ -1.52
PROM1O43490 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.56□□□□□ -1.52
PROM1O43490 TRGV6-201ENST00000417928 299 ntBASIC5.56□□□□□ -1.52
PROM1O43490 NENFP1-201ENST00000419476 466 ntBASIC5.56□□□□□ -1.52
PROM1O43490 EIF4A1P1-201ENST00000420241 934 ntBASIC5.56□□□□□ -1.52
PROM1O43490 BX284632.2-201ENST00000421091 399 ntBASIC5.56□□□□□ -1.52
PROM1O43490 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.56□□□□□ -1.52
PROM1O43490 BRWD1P3-201ENST00000428816 390 ntBASIC5.56□□□□□ -1.52
PROM1O43490 BX276092.6-201ENST00000430476 250 ntBASIC5.56□□□□□ -1.52
PROM1O43490 AC096638.2-201ENST00000434965 711 ntBASIC5.56□□□□□ -1.52
PROM1O43490 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.56□□□□□ -1.52
PROM1O43490 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PROM1O43490 Z84478.1-201ENST00000438230 1219 ntBASIC5.56□□□□□ -1.52
PROM1O43490 KRT8P51-201ENST00000438938 274 ntBASIC5.56□□□□□ -1.52
PROM1O43490 EEF1A1P39-201ENST00000440791 250 ntBASIC5.56□□□□□ -1.52
PROM1O43490 AL512605.1-202ENST00000441919 381 ntBASIC5.56□□□□□ -1.52
PROM1O43490 AL359955.2-201ENST00000445380 353 ntBASIC5.56□□□□□ -1.52
PROM1O43490 AL589880.1-201ENST00000448271 287 ntBASIC5.56□□□□□ -1.52
PROM1O43490 TRY2P-201ENST00000448860 689 ntBASIC5.56□□□□□ -1.52
PROM1O43490 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.56□□□□□ -1.52
PROM1O43490 RPL31P15-201ENST00000449770 338 ntBASIC5.56□□□□□ -1.52
PROM1O43490 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PROM1O43490 BX276092.8-201ENST00000455722 250 ntBASIC5.56□□□□□ -1.52
PROM1O43490 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.56□□□□□ -1.52
PROM1O43490 NXT1P1-201ENST00000458481 316 ntBASIC5.56□□□□□ -1.52
PROM1O43490 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.56□□□□□ -1.52
PROM1O43490 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PROM1O43490 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.56□□□□□ -1.52
PROM1O43490 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PROM1O43490 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PROM1O43490 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.56□□□□□ -1.52
PROM1O43490 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.56□□□□□ -1.52
PROM1O43490 AC078899.1-201ENST00000521432 1185 ntBASIC5.56□□□□□ -1.52
PROM1O43490 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.56□□□□□ -1.52
PROM1O43490 AP000926.4-201ENST00000527351 454 ntBASIC5.56□□□□□ -1.52
PROM1O43490 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PROM1O43490 AC091078.2-201ENST00000557145 559 ntBASIC5.56□□□□□ -1.52
PROM1O43490 AL163952.1-202ENST00000569625 600 ntBASIC5.56□□□□□ -1.52
PROM1O43490 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.56□□□□□ -1.52
PROM1O43490 MIR4675-201ENST00000577898 77 ntBASIC5.56□□□□□ -1.52
PROM1O43490 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.56□□□□□ -1.52
PROM1O43490 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.56□□□□□ -1.52
PROM1O43490 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.56□□□□□ -1.52
PROM1O43490 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.56□□□□□ -1.52
PROM1O43490 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.56□□□□□ -1.52
PROM1O43490 AC002069.2-201ENST00000603580 883 ntBASIC5.56□□□□□ -1.52
PROM1O43490 AC024060.1-201ENST00000607052 494 ntBASIC5.56□□□□□ -1.52
PROM1O43490 TUSC7.1-201ENST00000610969 165 ntBASIC5.56□□□□□ -1.52
PROM1O43490 AL139099.4-201ENST00000614802 114 ntBASIC5.56□□□□□ -1.52
PROM1O43490 AC123767.1-202ENST00000620407 817 ntBASIC5.56□□□□□ -1.52
PROM1O43490 AC131159.1-201ENST00000621854 213 ntBASIC5.56□□□□□ -1.52
PROM1O43490 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.56□□□□□ -1.52
PROM1O43490 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.56□□□□□ -1.52
PROM1O43490 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.56□□□□□ -1.52
PROM1O43490 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PROM1O43490 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.56□□□□□ -1.52
PROM1O43490 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PROM1O43490 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PROM1O43490 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.56□□□□□ -1.52
PROM1O43490 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PROM1O43490 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PROM1O43490 AC027088.4-201ENST00000611559 1947 ntBASIC5.56□□□□□ -1.52
PROM1O43490 AL132640.2-201ENST00000559968 1698 ntBASIC5.56□□□□□ -1.52
PROM1O43490 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.56□□□□□ -1.52
PROM1O43490 PARP4P2-201ENST00000446672 3326 ntBASIC5.56□□□□□ -1.52
PROM1O43490 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.56□□□□□ -1.52
PROM1O43490 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
PROM1O43490 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PROM1O43490 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.56□□□□□ -1.52
PROM1O43490 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PROM1O43490 LINC02019-201ENST00000608605 2060 ntBASIC5.55□□□□□ -1.52
PROM1O43490 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PROM1O43490 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PROM1O43490 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PROM1O43490 VPS35P1-201ENST00000563400 1518 ntBASIC5.55□□□□□ -1.52
PROM1O43490 AC016745.2-201ENST00000608834 3443 ntBASIC5.55□□□□□ -1.52
PROM1O43490 RNA5SP273-201ENST00000362484 113 ntBASIC5.55□□□□□ -1.52
PROM1O43490 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PROM1O43490 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PROM1O43490 AL356131.1-201ENST00000405826 414 ntBASIC5.55□□□□□ -1.52
PROM1O43490 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.55□□□□□ -1.52
PROM1O43490 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.55□□□□□ -1.52
PROM1O43490 AL008987.1-201ENST00000415528 237 ntBASIC5.55□□□□□ -1.52
PROM1O43490 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.55□□□□□ -1.52
PROM1O43490 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.55□□□□□ -1.52
PROM1O43490 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.55□□□□□ -1.52
PROM1O43490 RPL23AP19-201ENST00000436229 369 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms