Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC188H7C350 EI24P4-201ENST00000423683 1078 ntBASIC5.25□□□□□ -1.57
CCDC188H7C350 AC115283.1-201ENST00000427353 400 ntBASIC5.25□□□□□ -1.57
CCDC188H7C350 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC188H7C350 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC188H7C350 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC188H7C350 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC188H7C350 AL390119.1-201ENST00000440329 312 ntBASIC5.25□□□□□ -1.57
CCDC188H7C350 AC245517.2-201ENST00000442890 346 ntBASIC5.25□□□□□ -1.57
CCDC188H7C350 RANP1-206ENST00000455094 651 ntBASIC5.25□□□□□ -1.57
CCDC188H7C350 AC089999.1-201ENST00000460336 374 ntBASIC5.25□□□□□ -1.57
CCDC188H7C350 OR9N1P-202ENST00000494289 481 ntBASIC5.25□□□□□ -1.57
CCDC188H7C350 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC188H7C350 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.25□□□□□ -1.57
CCDC188H7C350 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC188H7C350 GTF2F2P1-201ENST00000511083 675 ntBASIC5.25□□□□□ -1.57
CCDC188H7C350 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC188H7C350 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC188H7C350 AC034244.2-201ENST00000514668 858 ntBASIC5.25□□□□□ -1.57
CCDC188H7C350 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC188H7C350 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC188H7C350 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC188H7C350 NANOGNBP2-201ENST00000544753 553 ntBASIC5.25□□□□□ -1.57
CCDC188H7C350 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC188H7C350 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC188H7C350 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC188H7C350 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC188H7C350 AC015802.5-201ENST00000607478 399 ntBASIC5.25□□□□□ -1.57
CCDC188H7C350 SNORD91B-202ENST00000608459 222 ntBASIC5.25□□□□□ -1.57
CCDC188H7C350 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CCDC188H7C350 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.25□□□□□ -1.57
CCDC188H7C350 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC188H7C350 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC188H7C350 AC097461.1-201ENST00000568928 2821 ntBASIC5.25□□□□□ -1.57
CCDC188H7C350 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CCDC188H7C350 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC188H7C350 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC188H7C350 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC188H7C350 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC188H7C350 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
CCDC188H7C350 AL133268.1-201ENST00000405676 1401 ntBASIC5.24□□□□□ -1.57
CCDC188H7C350 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC188H7C350 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
CCDC188H7C350 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC188H7C350 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC188H7C350 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC188H7C350 AC110792.3-201ENST00000595906 1614 ntBASIC5.24□□□□□ -1.57
CCDC188H7C350 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC188H7C350 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC188H7C350 RN7SKP292-201ENST00000365522 317 ntBASIC5.24□□□□□ -1.57
CCDC188H7C350 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC188H7C350 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC188H7C350 LRRC37BP1-201ENST00000398851 714 ntBASIC5.24□□□□□ -1.57
CCDC188H7C350 CCNB2P1-201ENST00000399411 1150 ntBASIC5.24□□□□□ -1.57
CCDC188H7C350 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC188H7C350 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC188H7C350 SDHDP6-201ENST00000414693 480 ntBASIC5.24□□□□□ -1.57
CCDC188H7C350 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC188H7C350 OR51A6P-201ENST00000418680 1004 ntBASIC5.24□□□□□ -1.57
CCDC188H7C350 EIF4HP2-201ENST00000424380 563 ntBASIC5.24□□□□□ -1.57
CCDC188H7C350 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC188H7C350 CACYBPP1-201ENST00000438592 684 ntBASIC5.24□□□□□ -1.57
CCDC188H7C350 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC188H7C350 AL691482.1-201ENST00000453255 87 ntBASIC5.24□□□□□ -1.57
CCDC188H7C350 RN7SL517P-201ENST00000462240 305 ntBASIC5.24□□□□□ -1.57
CCDC188H7C350 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC188H7C350 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC188H7C350 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.24□□□□□ -1.57
CCDC188H7C350 HMGB1P3-201ENST00000502802 616 ntBASIC5.24□□□□□ -1.57
CCDC188H7C350 RPEP1-201ENST00000504507 658 ntBASIC5.24□□□□□ -1.57
CCDC188H7C350 AC093770.1-201ENST00000511559 571 ntBASIC5.24□□□□□ -1.57
CCDC188H7C350 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC188H7C350 RNU6-941P-201ENST00000516346 108 ntBASIC5.24□□□□□ -1.57
CCDC188H7C350 AP000859.1-201ENST00000525536 307 ntBASIC5.24□□□□□ -1.57
CCDC188H7C350 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC188H7C350 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC188H7C350 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CCDC188H7C350 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC188H7C350 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC188H7C350 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC188H7C350 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC188H7C350 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC188H7C350 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC188H7C350 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC188H7C350 AC068020.1-201ENST00000594215 661 ntBASIC5.24□□□□□ -1.57
CCDC188H7C350 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC188H7C350 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC188H7C350 AC130352.1-201ENST00000602979 661 ntBASIC5.24□□□□□ -1.57
CCDC188H7C350 BX323046.1-201ENST00000610145 535 ntBASIC5.24□□□□□ -1.57
CCDC188H7C350 AL096712.1-201ENST00000614561 159 ntBASIC5.24□□□□□ -1.57
CCDC188H7C350 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.24□□□□□ -1.57
CCDC188H7C350 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC188H7C350 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC188H7C350 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CCDC188H7C350 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC188H7C350 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CCDC188H7C350 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CCDC188H7C350 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CCDC188H7C350 DDX18P5-201ENST00000534547 1306 ntBASIC5.23□□□□□ -1.57
CCDC188H7C350 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms