Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC099654.6-201ENST00000636487 512 ntBASIC6.03□□□□□ -1.44
COL20A1Q9P218 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.03□□□□□ -1.44
COL20A1Q9P218 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL20A1Q9P218 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.03□□□□□ -1.44
COL20A1Q9P218 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL20A1Q9P218 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
COL20A1Q9P218 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL20A1Q9P218 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
COL20A1Q9P218 AC092747.4-201ENST00000620519 1861 ntBASIC6.02□□□□□ -1.44
COL20A1Q9P218 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.44
COL20A1Q9P218 AC114947.2-201ENST00000565748 2125 ntBASIC6.02□□□□□ -1.45
COL20A1Q9P218 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
COL20A1Q9P218 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
COL20A1Q9P218 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL20A1Q9P218 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL20A1Q9P218 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL20A1Q9P218 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
COL20A1Q9P218 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.02□□□□□ -1.45
COL20A1Q9P218 RPL22P22-201ENST00000395439 379 ntBASIC6.02□□□□□ -1.45
COL20A1Q9P218 SNORA79B-201ENST00000410557 148 ntBASIC6.02□□□□□ -1.45
COL20A1Q9P218 RNU4-74P-201ENST00000411280 161 ntBASIC6.02□□□□□ -1.45
COL20A1Q9P218 OR13Z1P-201ENST00000416141 834 ntBASIC6.02□□□□□ -1.45
COL20A1Q9P218 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL20A1Q9P218 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.02□□□□□ -1.45
COL20A1Q9P218 AC093716.1-201ENST00000435923 377 ntBASIC6.02□□□□□ -1.45
COL20A1Q9P218 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.02□□□□□ -1.45
COL20A1Q9P218 RPS11P7-201ENST00000442125 465 ntBASIC6.02□□□□□ -1.45
COL20A1Q9P218 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.02□□□□□ -1.45
COL20A1Q9P218 AC044797.1-201ENST00000445744 679 ntBASIC6.02□□□□□ -1.45
COL20A1Q9P218 AC002075.1-201ENST00000457396 676 ntBASIC6.02□□□□□ -1.45
COL20A1Q9P218 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.02□□□□□ -1.45
COL20A1Q9P218 AC231760.1-201ENST00000498002 260 ntBASIC6.02□□□□□ -1.45
COL20A1Q9P218 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.02□□□□□ -1.45
COL20A1Q9P218 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.02□□□□□ -1.45
COL20A1Q9P218 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.02□□□□□ -1.45
COL20A1Q9P218 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.02□□□□□ -1.45
COL20A1Q9P218 AC133963.2-201ENST00000513686 578 ntBASIC6.02□□□□□ -1.45
COL20A1Q9P218 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC6.02□□□□□ -1.45
COL20A1Q9P218 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
COL20A1Q9P218 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.02□□□□□ -1.45
COL20A1Q9P218 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.02□□□□□ -1.45
COL20A1Q9P218 AL049870.4-201ENST00000555741 486 ntBASIC6.02□□□□□ -1.45
COL20A1Q9P218 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.02□□□□□ -1.45
COL20A1Q9P218 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL20A1Q9P218 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.02□□□□□ -1.45
COL20A1Q9P218 OR7A19P-201ENST00000608051 733 ntBASIC6.02□□□□□ -1.45
COL20A1Q9P218 AL139124.1-201ENST00000609123 421 ntBASIC6.02□□□□□ -1.45
COL20A1Q9P218 AC084824.4-201ENST00000620106 731 ntBASIC6.02□□□□□ -1.45
COL20A1Q9P218 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.02□□□□□ -1.45
COL20A1Q9P218 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL20A1Q9P218 AL590396.4-201ENST00000636779 956 ntBASIC6.02□□□□□ -1.45
COL20A1Q9P218 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.02□□□□□ -1.45
COL20A1Q9P218 AC006927.2-201ENST00000639256 389 ntBASIC6.02□□□□□ -1.45
COL20A1Q9P218 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
COL20A1Q9P218 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL20A1Q9P218 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.02□□□□□ -1.45
COL20A1Q9P218 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL20A1Q9P218 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
COL20A1Q9P218 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL20A1Q9P218 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL20A1Q9P218 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL20A1Q9P218 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL20A1Q9P218 AL591135.1-201ENST00000401578 5914 ntBASIC6.01□□□□□ -1.45
COL20A1Q9P218 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL20A1Q9P218 RNA5SP305-201ENST00000362665 119 ntBASIC6.01□□□□□ -1.45
COL20A1Q9P218 RN7SKP185-201ENST00000362813 326 ntBASIC6.01□□□□□ -1.45
COL20A1Q9P218 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 HSPA8P15-201ENST00000401676 786 ntBASIC6.01□□□□□ -1.45
COL20A1Q9P218 RN7SKP125-201ENST00000410481 302 ntBASIC6.01□□□□□ -1.45
COL20A1Q9P218 MTCO2P8-201ENST00000412213 658 ntBASIC6.01□□□□□ -1.45
COL20A1Q9P218 AC211486.3-201ENST00000412694 621 ntBASIC6.01□□□□□ -1.45
COL20A1Q9P218 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 AL158825.1-201ENST00000414735 521 ntBASIC6.01□□□□□ -1.45
COL20A1Q9P218 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 WDR78-207ENST00000488333 613 ntTSL 3 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 AC109462.1-201ENST00000491087 368 ntBASIC6.01□□□□□ -1.45
COL20A1Q9P218 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL20A1Q9P218 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 UBE2V1P12-201ENST00000503954 474 ntBASIC6.01□□□□□ -1.45
COL20A1Q9P218 SUMO2P4-201ENST00000504193 276 ntBASIC6.01□□□□□ -1.45
COL20A1Q9P218 AC069306.1-201ENST00000507006 843 ntBASIC6.01□□□□□ -1.45
COL20A1Q9P218 BTG4P1-201ENST00000510421 183 ntBASIC6.01□□□□□ -1.45
COL20A1Q9P218 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 AP001372.4-201ENST00000524889 472 ntBASIC6.01□□□□□ -1.45
COL20A1Q9P218 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL20A1Q9P218 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL20A1Q9P218 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms