Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 Z69908.1-201ENST00000622603 247 ntBASIC6.4□□□□□ -1.38
TRIM55Q9BYV6 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM55Q9BYV6 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.4□□□□□ -1.38
TRIM55Q9BYV6 FP325313.1-201ENST00000638228 703 ntBASIC6.4□□□□□ -1.38
TRIM55Q9BYV6 AC011455.2-201ENST00000599320 3336 ntBASIC6.4□□□□□ -1.38
TRIM55Q9BYV6 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM55Q9BYV6 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
TRIM55Q9BYV6 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
TRIM55Q9BYV6 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
TRIM55Q9BYV6 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM55Q9BYV6 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.4□□□□□ -1.39
TRIM55Q9BYV6 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
TRIM55Q9BYV6 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 RNU1-65P-201ENST00000363919 148 ntBASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 RNU4-24P-201ENST00000364565 139 ntBASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 GNG5P2-201ENST00000372054 207 ntBASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AL121835.1-201ENST00000404250 354 ntBASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 RPL12P23-201ENST00000405880 490 ntBASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AL590635.1-201ENST00000406314 586 ntBASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 MIR1275-201ENST00000408770 80 ntBASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 CYP4F30P-202ENST00000420048 405 ntBASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 RNGTTP1-201ENST00000420965 728 ntBASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 RPP40P1-201ENST00000426762 456 ntBASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AC007559.1-201ENST00000428736 355 ntBASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AC098826.1-201ENST00000433943 471 ntBASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 GAPDHP37-201ENST00000442317 968 ntBASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 REG1CP-206ENST00000447469 496 ntBASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AC009961.3-201ENST00000449832 765 ntBASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AC011352.3-201ENST00000505162 593 ntBASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 HSPE1P23-201ENST00000509838 286 ntBASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 MTND5P13-201ENST00000513046 1079 ntBASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 MIR4310-201ENST00000582950 57 ntBASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AL499605.1-201ENST00000604628 403 ntBASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AC074140.1-201ENST00000621617 208 ntBASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AC124312.6-202ENST00000623624 418 ntBASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM55Q9BYV6 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC092724.1-201ENST00000624623 3397 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 Y_RNA.51-201ENST00000362725 102 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 Y_RNA.77-201ENST00000362962 107 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 RNU6-582P-201ENST00000362989 107 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC234782.4-201ENST00000417646 1048 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 NME1P1-201ENST00000420914 382 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 DNAJA1P2-201ENST00000421360 1197 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms