Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
SCAPERQ9BY12 AL050305.1-201ENST00000399993 1230 ntBASIC7.32□□□□□ -1.24
SCAPERQ9BY12 HNRNPA1P29-201ENST00000426409 879 ntBASIC7.32□□□□□ -1.24
SCAPERQ9BY12 RPL7AP52-201ENST00000458096 790 ntBASIC7.32□□□□□ -1.24
SCAPERQ9BY12 SNRPCP3-201ENST00000474888 476 ntBASIC7.32□□□□□ -1.24
SCAPERQ9BY12 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SCAPERQ9BY12 AC073358.1-201ENST00000505671 684 ntBASIC7.32□□□□□ -1.24
SCAPERQ9BY12 AC111000.6-201ENST00000514471 709 ntBASIC7.32□□□□□ -1.24
SCAPERQ9BY12 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SCAPERQ9BY12 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
SCAPERQ9BY12 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC7.32□□□□□ -1.24
SCAPERQ9BY12 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC7.32□□□□□ -1.24
SCAPERQ9BY12 AL049794.2-201ENST00000616301 365 ntBASIC7.32□□□□□ -1.24
SCAPERQ9BY12 AC092451.3-201ENST00000625067 1343 ntBASIC7.32□□□□□ -1.24
SCAPERQ9BY12 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC7.32□□□□□ -1.24
SCAPERQ9BY12 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
SCAPERQ9BY12 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCAPERQ9BY12 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC7.31□□□□□ -1.24
SCAPERQ9BY12 AC008758.3-201ENST00000507003 1829 ntBASIC7.31□□□□□ -1.24
SCAPERQ9BY12 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCAPERQ9BY12 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCAPERQ9BY12 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC7.31□□□□□ -1.24
SCAPERQ9BY12 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCAPERQ9BY12 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
SCAPERQ9BY12 SNORA48.4-201ENST00000391089 134 ntBASIC7.31□□□□□ -1.24
SCAPERQ9BY12 AL035079.1-201ENST00000405210 287 ntBASIC7.31□□□□□ -1.24
SCAPERQ9BY12 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC7.31□□□□□ -1.24
SCAPERQ9BY12 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC7.31□□□□□ -1.24
SCAPERQ9BY12 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SCAPERQ9BY12 RPL7AP61-201ENST00000443410 636 ntBASIC7.31□□□□□ -1.24
SCAPERQ9BY12 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC7.31□□□□□ -1.24
SCAPERQ9BY12 AC007016.1-201ENST00000512110 244 ntBASIC7.31□□□□□ -1.24
SCAPERQ9BY12 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SCAPERQ9BY12 MIR92B-201ENST00000607575 96 ntBASIC7.31□□□□□ -1.24
SCAPERQ9BY12 AL049536.1-201ENST00000625043 744 ntBASIC7.31□□□□□ -1.24
SCAPERQ9BY12 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SCAPERQ9BY12 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC7.31□□□□□ -1.24
SCAPERQ9BY12 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCAPERQ9BY12 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCAPERQ9BY12 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC7.31□□□□□ -1.24
SCAPERQ9BY12 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.31□□□□□ -1.24
SCAPERQ9BY12 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
SCAPERQ9BY12 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
SCAPERQ9BY12 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
SCAPERQ9BY12 RPL32P23-201ENST00000397237 405 ntBASIC7.3□□□□□ -1.24
SCAPERQ9BY12 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC7.3□□□□□ -1.24
SCAPERQ9BY12 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.3□□□□□ -1.24
SCAPERQ9BY12 AC097523.2-201ENST00000435551 652 ntBASIC7.3□□□□□ -1.24
SCAPERQ9BY12 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
SCAPERQ9BY12 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
SCAPERQ9BY12 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC7.3□□□□□ -1.24
SCAPERQ9BY12 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.3□□□□□ -1.24
SCAPERQ9BY12 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC7.3□□□□□ -1.24
SCAPERQ9BY12 AC083837.1-201ENST00000565297 2994 ntBASIC7.3□□□□□ -1.24
SCAPERQ9BY12 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC7.3□□□□□ -1.24
SCAPERQ9BY12 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC7.3□□□□□ -1.24
SCAPERQ9BY12 AC069061.3-201ENST00000582254 823 ntBASIC7.3□□□□□ -1.24
SCAPERQ9BY12 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC7.3□□□□□ -1.24
SCAPERQ9BY12 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.3□□□□□ -1.24
SCAPERQ9BY12 SCARNA15-201ENST00000607520 4325 ntBASIC7.3□□□□□ -1.24
SCAPERQ9BY12 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SCAPERQ9BY12 RMST-209ENST00000639542 3269 ntTSL 5 BASIC7.3□□□□□ -1.24
SCAPERQ9BY12 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
SCAPERQ9BY12 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SCAPERQ9BY12 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.3□□□□□ -1.24
SCAPERQ9BY12 AC025574.1-201ENST00000554784 1653 ntBASIC7.29□□□□□ -1.24
SCAPERQ9BY12 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC7.29□□□□□ -1.24
SCAPERQ9BY12 SMG1P6-201ENST00000532337 2930 ntBASIC7.29□□□□□ -1.24
SCAPERQ9BY12 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SCAPERQ9BY12 RNA5SP453-201ENST00000362503 119 ntBASIC7.29□□□□□ -1.24
SCAPERQ9BY12 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SCAPERQ9BY12 U3.32-201ENST00000408116 212 ntBASIC7.29□□□□□ -1.24
SCAPERQ9BY12 AL591848.1-201ENST00000413092 322 ntBASIC7.29□□□□□ -1.24
SCAPERQ9BY12 RPL7P57-201ENST00000423238 740 ntBASIC7.29□□□□□ -1.24
SCAPERQ9BY12 AL158073.1-201ENST00000426848 1104 ntBASIC7.29□□□□□ -1.24
SCAPERQ9BY12 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC7.29□□□□□ -1.24
SCAPERQ9BY12 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC7.29□□□□□ -1.24
SCAPERQ9BY12 AL359073.1-201ENST00000448036 403 ntBASIC7.29□□□□□ -1.24
SCAPERQ9BY12 RPL23AP24-201ENST00000458203 385 ntBASIC7.29□□□□□ -1.24
SCAPERQ9BY12 MTCO1P35-201ENST00000515270 228 ntBASIC7.29□□□□□ -1.24
SCAPERQ9BY12 NDUFB4P11-201ENST00000560510 395 ntBASIC7.29□□□□□ -1.24
SCAPERQ9BY12 AC093227.2-201ENST00000589357 285 ntBASIC7.29□□□□□ -1.24
SCAPERQ9BY12 CCDC58P3-201ENST00000590792 430 ntBASIC7.29□□□□□ -1.24
SCAPERQ9BY12 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SCAPERQ9BY12 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SCAPERQ9BY12 AL731566.1-201ENST00000620490 1937 ntBASIC7.29□□□□□ -1.24
SCAPERQ9BY12 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SCAPERQ9BY12 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SCAPERQ9BY12 AP000473.2-201ENST00000602659 1537 ntBASIC7.29□□□□□ -1.24
SCAPERQ9BY12 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
SCAPERQ9BY12 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC7.28□□□□□ -1.24
SCAPERQ9BY12 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SCAPERQ9BY12 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC7.28□□□□□ -1.24
SCAPERQ9BY12 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SCAPERQ9BY12 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SCAPERQ9BY12 SNORA70.6-201ENST00000383934 134 ntBASIC7.28□□□□□ -1.24
SCAPERQ9BY12 OR51B3P-201ENST00000412287 913 ntBASIC7.28□□□□□ -1.24
SCAPERQ9BY12 LINC00993-201ENST00000420453 540 ntBASIC7.28□□□□□ -1.24
SCAPERQ9BY12 AL389915.1-201ENST00000422463 466 ntBASIC7.28□□□□□ -1.24
SCAPERQ9BY12 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms