Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MTND4P32-201ENST00000437189 1237 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 TCEA1P3-201ENST00000443005 880 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 HSFY3P-201ENST00000444242 1191 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 SEPT14P24-201ENST00000447236 180 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 AL589880.1-201ENST00000448271 287 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 AL157777.1-201ENST00000468100 304 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 PRDX3P4-201ENST00000470828 747 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 PFN1P6-201ENST00000476786 399 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 AC092865.4-201ENST00000477936 615 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 CDH12P2-201ENST00000504393 298 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 AC074087.1-201ENST00000512059 724 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 RN7SKP35-201ENST00000517210 151 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 HIGD1AP18-201ENST00000520730 278 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 AC078899.1-201ENST00000521432 1185 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 AC104417.1-201ENST00000523974 751 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNX18Q96RF0 OR4A2P-201ENST00000527276 913 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 TRIM51DP-201ENST00000529746 596 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 AC090424.1-201ENST00000535243 736 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 DUXAP6-201ENST00000553858 601 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 AP005262.1-201ENST00000582646 997 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 AC015802.2-201ENST00000589690 189 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 AC091057.2-201ENST00000602594 792 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 AC067773.1-201ENST00000603284 1094 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 NANOGP3-201ENST00000605855 286 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 AP001437.1-201ENST00000608783 456 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 FAM27E2-201ENST00000619668 403 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 AC010435.1-201ENST00000623353 1177 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SNX18Q96RF0 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SNX18Q96RF0 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNX18Q96RF0 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNX18Q96RF0 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SNX18Q96RF0 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SNX18Q96RF0 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SNX18Q96RF0 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNX18Q96RF0 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SNX18Q96RF0 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 RBMY1HP-201ENST00000382759 1389 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SNX18Q96RF0 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SNX18Q96RF0 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SNX18Q96RF0 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SNX18Q96RF0 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SNX18Q96RF0 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 AC011755.1-201ENST00000623763 2049 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SNX18Q96RF0 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SNX18Q96RF0 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SNX18Q96RF0 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SNX18Q96RF0 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 OR5H2-201ENST00000355273 945 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 RNU6-236P-201ENST00000363886 106 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 Y_RNA.472-201ENST00000384322 102 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 SKINT1L-201ENST00000401057 817 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 AL132875.1-201ENST00000403623 949 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 BX119904.4-201ENST00000424402 301 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SNX18Q96RF0 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 PNKDP1-201ENST00000435914 430 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 RPS7P3-201ENST00000443360 580 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 FRG2FP-204ENST00000453982 852 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms