Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.25□□□□□ -1.57
VMP1Q96GC9 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.25□□□□□ -1.57
VMP1Q96GC9 IFNWP4-201ENST00000453148 294 ntBASIC5.25□□□□□ -1.57
VMP1Q96GC9 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.25□□□□□ -1.57
VMP1Q96GC9 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.25□□□□□ -1.57
VMP1Q96GC9 RN7SL466P-201ENST00000497546 295 ntBASIC5.25□□□□□ -1.57
VMP1Q96GC9 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
VMP1Q96GC9 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.25□□□□□ -1.57
VMP1Q96GC9 RNA5SP360-201ENST00000516555 118 ntBASIC5.25□□□□□ -1.57
VMP1Q96GC9 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.25□□□□□ -1.57
VMP1Q96GC9 AC024940.3-201ENST00000538551 316 ntBASIC5.25□□□□□ -1.57
VMP1Q96GC9 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.25□□□□□ -1.57
VMP1Q96GC9 AC139697.1-201ENST00000548429 745 ntBASIC5.25□□□□□ -1.57
VMP1Q96GC9 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.25□□□□□ -1.57
VMP1Q96GC9 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.25□□□□□ -1.57
VMP1Q96GC9 SNORD95-201ENST00000579879 68 ntBASIC5.25□□□□□ -1.57
VMP1Q96GC9 MIR7853-201ENST00000584820 132 ntBASIC5.25□□□□□ -1.57
VMP1Q96GC9 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.25□□□□□ -1.57
VMP1Q96GC9 PPATP2-201ENST00000605635 508 ntBASIC5.25□□□□□ -1.57
VMP1Q96GC9 AC242628.1-201ENST00000606810 391 ntBASIC5.25□□□□□ -1.57
VMP1Q96GC9 MIR6768-201ENST00000610734 72 ntBASIC5.25□□□□□ -1.57
VMP1Q96GC9 AC243654.2-201ENST00000612843 443 ntBASIC5.25□□□□□ -1.57
VMP1Q96GC9 MIR6862-1-201ENST00000613016 70 ntBASIC5.25□□□□□ -1.57
VMP1Q96GC9 MIR6862-2-201ENST00000614755 70 ntBASIC5.25□□□□□ -1.57
VMP1Q96GC9 AC009318.3-201ENST00000616916 503 ntBASIC5.25□□□□□ -1.57
VMP1Q96GC9 LINC00901.1-201ENST00000617252 152 ntBASIC5.25□□□□□ -1.57
VMP1Q96GC9 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VMP1Q96GC9 AL035661.1-201ENST00000620459 1144 ntBASIC5.25□□□□□ -1.57
VMP1Q96GC9 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
VMP1Q96GC9 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.25□□□□□ -1.57
VMP1Q96GC9 AC022893.2-201ENST00000564832 3296 ntBASIC5.25□□□□□ -1.57
VMP1Q96GC9 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VMP1Q96GC9 AL592437.2-201ENST00000421655 2434 ntBASIC5.25□□□□□ -1.57
VMP1Q96GC9 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VMP1Q96GC9 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
VMP1Q96GC9 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
VMP1Q96GC9 AL592182.3-201ENST00000642132 3304 ntBASIC5.25□□□□□ -1.57
VMP1Q96GC9 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VMP1Q96GC9 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VMP1Q96GC9 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.24□□□□□ -1.57
VMP1Q96GC9 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.24□□□□□ -1.57
VMP1Q96GC9 AC007390.2-201ENST00000606229 3803 ntBASIC5.24□□□□□ -1.57
VMP1Q96GC9 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VMP1Q96GC9 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.24□□□□□ -1.57
VMP1Q96GC9 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
VMP1Q96GC9 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VMP1Q96GC9 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
VMP1Q96GC9 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
VMP1Q96GC9 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VMP1Q96GC9 RNU6-984P-201ENST00000363236 109 ntBASIC5.24□□□□□ -1.57
VMP1Q96GC9 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.24□□□□□ -1.57
VMP1Q96GC9 MIR323B-201ENST00000385269 82 ntBASIC5.24□□□□□ -1.57
VMP1Q96GC9 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VMP1Q96GC9 Z86062.1-201ENST00000406773 777 ntBASIC5.24□□□□□ -1.57
VMP1Q96GC9 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.24□□□□□ -1.57
VMP1Q96GC9 GSTM3P2-201ENST00000412746 530 ntBASIC5.24□□□□□ -1.57
VMP1Q96GC9 RNF10P1-201ENST00000418589 369 ntBASIC5.24□□□□□ -1.57
VMP1Q96GC9 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.24□□□□□ -1.57
VMP1Q96GC9 AC073069.1-201ENST00000428657 441 ntBASIC5.24□□□□□ -1.57
VMP1Q96GC9 AL121776.1-201ENST00000429337 372 ntBASIC5.24□□□□□ -1.57
VMP1Q96GC9 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.24□□□□□ -1.57
VMP1Q96GC9 TMEM183AP1-205ENST00000432739 290 ntBASIC5.24□□□□□ -1.57
VMP1Q96GC9 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.24□□□□□ -1.57
VMP1Q96GC9 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VMP1Q96GC9 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.24□□□□□ -1.57
VMP1Q96GC9 HMGB1P5-202ENST00000451497 985 ntBASIC5.24□□□□□ -1.57
VMP1Q96GC9 AC116562.1-201ENST00000485355 781 ntBASIC5.24□□□□□ -1.57
VMP1Q96GC9 AC107398.1-201ENST00000486904 505 ntBASIC5.24□□□□□ -1.57
VMP1Q96GC9 DUTP7-201ENST00000507982 486 ntBASIC5.24□□□□□ -1.57
VMP1Q96GC9 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.24□□□□□ -1.57
VMP1Q96GC9 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.24□□□□□ -1.57
VMP1Q96GC9 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.24□□□□□ -1.57
VMP1Q96GC9 NMNAT1P5-201ENST00000559657 841 ntBASIC5.24□□□□□ -1.57
VMP1Q96GC9 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.24□□□□□ -1.57
VMP1Q96GC9 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.24□□□□□ -1.57
VMP1Q96GC9 OR1F2P-201ENST00000570470 933 ntBASIC5.24□□□□□ -1.57
VMP1Q96GC9 HNRNPCP4-201ENST00000571636 900 ntBASIC5.24□□□□□ -1.57
VMP1Q96GC9 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.24□□□□□ -1.57
VMP1Q96GC9 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.24□□□□□ -1.57
VMP1Q96GC9 AL589674.2-201ENST00000604304 337 ntBASIC5.24□□□□□ -1.57
VMP1Q96GC9 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VMP1Q96GC9 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.24□□□□□ -1.57
VMP1Q96GC9 AL049767.1-202ENST00000637826 242 ntBASIC5.24□□□□□ -1.57
VMP1Q96GC9 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VMP1Q96GC9 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VMP1Q96GC9 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VMP1Q96GC9 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
VMP1Q96GC9 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.24□□□□□ -1.57
VMP1Q96GC9 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
VMP1Q96GC9 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
VMP1Q96GC9 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VMP1Q96GC9 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VMP1Q96GC9 AL049555.1-201ENST00000562834 1933 ntBASIC5.23□□□□□ -1.57
VMP1Q96GC9 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
VMP1Q96GC9 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VMP1Q96GC9 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
VMP1Q96GC9 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 AC096921.1-201ENST00000411661 375 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms