Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFT1Q96AA3 Z95327.2-201ENST00000414579 1873 ntBASIC4.68□□□□□ -1.66
RFT1Q96AA3 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFT1Q96AA3 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RFT1Q96AA3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFT1Q96AA3 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFT1Q96AA3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RFT1Q96AA3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFT1Q96AA3 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RFT1Q96AA3 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFT1Q96AA3 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFT1Q96AA3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 AC106872.5-201ENST00000508856 1416 ntBASIC4.67□□□□□ -1.66
RFT1Q96AA3 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFT1Q96AA3 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFT1Q96AA3 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFT1Q96AA3 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFT1Q96AA3 LYPLA1P3-201ENST00000402650 695 ntBASIC4.67□□□□□ -1.66
RFT1Q96AA3 AL512430.2-201ENST00000406786 339 ntBASIC4.67□□□□□ -1.66
RFT1Q96AA3 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 AKR1B10P1-201ENST00000425765 942 ntBASIC4.67□□□□□ -1.66
RFT1Q96AA3 AL662874.1-201ENST00000426065 230 ntBASIC4.67□□□□□ -1.66
RFT1Q96AA3 OR6D1P-201ENST00000436165 939 ntBASIC4.67□□□□□ -1.66
RFT1Q96AA3 DNAJA1P5-201ENST00000440278 943 ntBASIC4.67□□□□□ -1.66
RFT1Q96AA3 EEF1B2P6-201ENST00000445713 673 ntBASIC4.67□□□□□ -1.66
RFT1Q96AA3 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RFT1Q96AA3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 AC011476.1-201ENST00000466725 307 ntBASIC4.67□□□□□ -1.66
RFT1Q96AA3 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 AC022133.1-201ENST00000490961 571 ntBASIC4.67□□□□□ -1.66
RFT1Q96AA3 RPL15P21-201ENST00000495592 567 ntBASIC4.67□□□□□ -1.66
RFT1Q96AA3 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 AC113430.1-201ENST00000506872 718 ntBASIC4.67□□□□□ -1.66
RFT1Q96AA3 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 AC138938.1-201ENST00000515431 782 ntBASIC4.67□□□□□ -1.66
RFT1Q96AA3 AC103833.1-201ENST00000517442 172 ntBASIC4.67□□□□□ -1.66
RFT1Q96AA3 AF186190.1-201ENST00000517470 480 ntBASIC4.67□□□□□ -1.66
RFT1Q96AA3 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 AC022360.1-201ENST00000521058 340 ntBASIC4.67□□□□□ -1.66
RFT1Q96AA3 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 OR11H3P-201ENST00000554547 982 ntBASIC4.67□□□□□ -1.66
RFT1Q96AA3 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 AC135178.6-201ENST00000605314 398 ntBASIC4.67□□□□□ -1.66
RFT1Q96AA3 AC131238.1-201ENST00000617135 328 ntBASIC4.67□□□□□ -1.66
RFT1Q96AA3 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 AC145207.9-201ENST00000623802 325 ntBASIC4.67□□□□□ -1.66
RFT1Q96AA3 AC135068.5-201ENST00000624197 983 ntBASIC4.67□□□□□ -1.66
RFT1Q96AA3 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 AC129915.3-201ENST00000634128 948 ntBASIC4.67□□□□□ -1.66
RFT1Q96AA3 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.67□□□□□ -1.66
RFT1Q96AA3 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RFT1Q96AA3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFT1Q96AA3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.67□□□□□ -1.66
RFT1Q96AA3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.66□□□□□ -1.66
RFT1Q96AA3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
RFT1Q96AA3 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.66□□□□□ -1.66
RFT1Q96AA3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFT1Q96AA3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.66□□□□□ -1.66
RFT1Q96AA3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFT1Q96AA3 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RFT1Q96AA3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
RFT1Q96AA3 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RFT1Q96AA3 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.66□□□□□ -1.66
RFT1Q96AA3 RNU6-532P-201ENST00000384318 107 ntBASIC4.66□□□□□ -1.66
RFT1Q96AA3 SNORA16A-201ENST00000384342 137 ntBASIC4.66□□□□□ -1.66
RFT1Q96AA3 MIR551A-201ENST00000385042 96 ntBASIC4.66□□□□□ -1.66
RFT1Q96AA3 AL356057.1-202ENST00000402263 756 ntBASIC4.66□□□□□ -1.66
RFT1Q96AA3 RN7SKP240-201ENST00000410583 375 ntBASIC4.66□□□□□ -1.66
RFT1Q96AA3 RN7SKP222-201ENST00000410651 315 ntBASIC4.66□□□□□ -1.66
RFT1Q96AA3 RNU4-74P-201ENST00000411280 161 ntBASIC4.66□□□□□ -1.66
RFT1Q96AA3 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.66□□□□□ -1.66
RFT1Q96AA3 RPL36AP10-201ENST00000421785 322 ntBASIC4.66□□□□□ -1.66
RFT1Q96AA3 AL133173.1-201ENST00000423458 397 ntBASIC4.66□□□□□ -1.66
RFT1Q96AA3 AC012519.1-201ENST00000424588 610 ntBASIC4.66□□□□□ -1.66
RFT1Q96AA3 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.66□□□□□ -1.66
RFT1Q96AA3 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.66□□□□□ -1.66
RFT1Q96AA3 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.66□□□□□ -1.66
RFT1Q96AA3 AC005297.1-201ENST00000444765 862 ntBASIC4.66□□□□□ -1.66
RFT1Q96AA3 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.66□□□□□ -1.66
RFT1Q96AA3 RPL37AP8-201ENST00000494116 276 ntBASIC4.66□□□□□ -1.66
RFT1Q96AA3 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms