Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 RPL30P6-201ENST00000475925 342 ntBASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 AC098583.1-201ENST00000480875 255 ntBASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 TRBV5-2-201ENST00000489095 273 ntBASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 AC008494.2-201ENST00000514544 370 ntBASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 MTCO2P32-201ENST00000514865 403 ntBASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 MRPS5P3-201ENST00000515577 166 ntBASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 SNORA70.11-201ENST00000515987 138 ntBASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 SNORA70.13-201ENST00000516116 138 ntBASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 AC044913.1-201ENST00000557200 430 ntBASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 LINC00556-201ENST00000569603 412 ntBASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 AC012213.3-201ENST00000577199 777 ntBASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 VN1R90P-201ENST00000595717 726 ntBASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 MIR6885-201ENST00000612241 66 ntBASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 AL359757.1-201ENST00000623176 255 ntBASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 MIR4278-201ENST00000636094 69 ntBASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 FP325313.1-201ENST00000638228 703 ntBASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 AL390237.1-201ENST00000404226 1415 ntBASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PIK3C3Q8NEB9 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 MTCO1P6-201ENST00000481192 1384 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 NSRP1P1-201ENST00000444067 1693 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 RNU6-666P-201ENST00000363499 107 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 SNORA43.1-201ENST00000364863 140 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 RNA5SP485-201ENST00000365053 119 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 RNA5SP85-201ENST00000365378 119 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 RNU6-185P-201ENST00000384421 107 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 PEX12P1-201ENST00000400284 1048 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 AL445213.1-201ENST00000412589 747 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 AL139421.1-201ENST00000423010 169 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 AC009784.1-201ENST00000426484 460 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 NANOGP4-201ENST00000427230 913 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 FTLP19-201ENST00000433300 394 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 MTCO1P52-201ENST00000433928 531 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 AC234064.1-201ENST00000436312 247 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 GTF2IP7-202ENST00000436677 309 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 RPSAP40-201ENST00000442343 891 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 MTCYBP3-201ENST00000445588 1137 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 AC005002.1-201ENST00000447458 540 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 MTND2P19-201ENST00000449129 1012 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 RPL12P26-201ENST00000452430 487 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 AC021205.1-201ENST00000468797 348 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 GAPDHP36-201ENST00000480688 918 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 MTATP6P1-201ENST00000514057 681 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 AC020937.1-201ENST00000519677 1013 ntBASIC5.7□□□□□ -1.5
PIK3C3Q8NEB9 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms