Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AC078880.4-201ENST00000617627 1749 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 MKI67P1-201ENST00000604297 1460 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AC134882.1-201ENST00000603738 1676 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 MFSD8-219ENST00000641228 2559 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 RBMX2P2-201ENST00000257020 946 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 RNA5SP149-201ENST00000364952 92 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 RNU6-952P-201ENST00000391164 108 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 MSRB1P1-201ENST00000396851 354 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 RNU6-373P-201ENST00000411247 98 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AC211486.3-201ENST00000412694 621 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AL354751.2-201ENST00000415471 210 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AC127537.1-201ENST00000418183 748 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AL512882.1-201ENST00000436086 832 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AL139135.2-201ENST00000445040 433 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 ATP5G1P6-201ENST00000451206 412 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 RPL31P50-201ENST00000471002 296 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 ADH7-205ENST00000482593 1420 ntTSL 3 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 RN7SL153P-201ENST00000486501 292 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AC055733.3-201ENST00000505214 523 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 NMNAT1P4-201ENST00000505598 840 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 TBCA-203ENST00000517679 545 ntTSL 3 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 IGHVIII-82-201ENST00000522058 250 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 ZNF345-205ENST00000526123 458 ntTSL 3 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AP003181.2-201ENST00000528941 181 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AC122134.1-201ENST00000565664 1104 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 DNM1P34-202ENST00000567850 315 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AC090312.1-201ENST00000580637 348 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AL031429.2-201ENST00000602605 649 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AC010719.1-201ENST00000602992 747 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 RPL23AP90-201ENST00000603820 236 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 MIR7162-201ENST00000611134 69 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 RMST_3.1-201ENST00000611651 109 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 MIR6745-201ENST00000612694 127 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AC243830.3-201ENST00000616810 376 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AC245028.3-201ENST00000618197 285 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AL160413.1-201ENST00000622780 310 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 ACTR3BP2-202ENST00000623630 1338 ntBASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
DEPDC4Q8N2C3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms