Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AF117829.2-201ENST00000619538 361 ntBASIC4.68□□□□□ -1.66
NIPAL3Q6P499 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.68□□□□□ -1.66
NIPAL3Q6P499 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.68□□□□□ -1.66
NIPAL3Q6P499 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
NIPAL3Q6P499 AC119674.1-220ENST00000641502 1048 ntBASIC4.68□□□□□ -1.66
NIPAL3Q6P499 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.68□□□□□ -1.66
NIPAL3Q6P499 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
NIPAL3Q6P499 AC019072.1-201ENST00000604535 1551 ntBASIC4.68□□□□□ -1.66
NIPAL3Q6P499 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NIPAL3Q6P499 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.68□□□□□ -1.66
NIPAL3Q6P499 AC000374.1-201ENST00000434698 1745 ntBASIC4.68□□□□□ -1.66
NIPAL3Q6P499 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.68□□□□□ -1.66
NIPAL3Q6P499 AC092747.4-201ENST00000620519 1861 ntBASIC4.68□□□□□ -1.66
NIPAL3Q6P499 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NIPAL3Q6P499 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.68□□□□□ -1.66
NIPAL3Q6P499 AC011493.1-201ENST00000596753 1632 ntBASIC4.68□□□□□ -1.66
NIPAL3Q6P499 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NIPAL3Q6P499 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 AL672167.1-204ENST00000641875 3017 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 RNU6-152P-201ENST00000384037 107 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 RNU1-74P-201ENST00000384108 171 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 OR8V1P-201ENST00000395193 873 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 AL390316.1-201ENST00000406279 553 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 MIR1286-201ENST00000408112 78 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 AP000534.2-201ENST00000412729 568 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 NPM1P40-201ENST00000412758 733 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 BTF3P9-201ENST00000418784 283 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 SLC35E1P1-201ENST00000419313 864 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 AC108075.1-201ENST00000424692 529 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 AC093655.2-201ENST00000425735 631 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 AC007563.3-201ENST00000433233 371 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 RPL35AP21-201ENST00000437667 333 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 RPL7AP61-201ENST00000443410 636 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 MRPL35P2-201ENST00000448009 511 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 MORF4L1P4-201ENST00000450245 976 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 UBA52P7-201ENST00000486088 380 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 RPS4XP20-201ENST00000505751 772 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 ACTR6P1-201ENST00000514311 1104 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 AC012400.1-201ENST00000518452 381 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 AC105031.1-201ENST00000518550 476 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 AC074029.2-201ENST00000551045 634 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 AC004825.1-201ENST00000555068 586 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 MIR4489-201ENST00000578869 62 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 MIR6826-201ENST00000617808 98 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 AC015914.2-201ENST00000618167 288 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 AC118658.2-201ENST00000618697 459 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 AP002505.2-201ENST00000623585 696 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 AL355480.1-201ENST00000629041 99 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 AC063976.2-201ENST00000425667 3556 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 AP000542.2-201ENST00000623199 6179 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 AL022393.1-201ENST00000625142 1677 ntBASIC4.67□□□□□ -1.66
NIPAL3Q6P499 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NIPAL3Q6P499 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 SMG1P4-204ENST00000523028 4131 ntBASIC4.66□□□□□ -1.66
NIPAL3Q6P499 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 RNA5SP183-201ENST00000362452 119 ntBASIC4.66□□□□□ -1.66
NIPAL3Q6P499 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 AL035079.1-201ENST00000405210 287 ntBASIC4.66□□□□□ -1.66
NIPAL3Q6P499 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 OR5M12P-201ENST00000423388 929 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms