Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RNF43Q68DV7 AC005225.5-201ENST00000623547 2225 ntBASIC6.84□□□□□ -1.31
RNF43Q68DV7 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RNF43Q68DV7 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RNF43Q68DV7 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RNF43Q68DV7 TMSB4XP4-201ENST00000323496 618 ntBASIC6.84□□□□□ -1.31
RNF43Q68DV7 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF43Q68DV7 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF43Q68DV7 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 RPL23AP59-201ENST00000399415 461 ntBASIC6.84□□□□□ -1.31
RNF43Q68DV7 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 PRELID1P1-201ENST00000403549 660 ntBASIC6.84□□□□□ -1.31
RNF43Q68DV7 RN7SKP129-201ENST00000410288 299 ntBASIC6.84□□□□□ -1.31
RNF43Q68DV7 RN7SKP296-201ENST00000411185 341 ntBASIC6.84□□□□□ -1.31
RNF43Q68DV7 RPL21P32-201ENST00000419877 477 ntBASIC6.84□□□□□ -1.31
RNF43Q68DV7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 AL645939.3-201ENST00000435408 225 ntBASIC6.84□□□□□ -1.31
RNF43Q68DV7 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 AC069439.1-201ENST00000494739 167 ntBASIC6.84□□□□□ -1.31
RNF43Q68DV7 AC104971.1-201ENST00000495117 578 ntBASIC6.84□□□□□ -1.31
RNF43Q68DV7 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 NDUFA5P12-201ENST00000503796 343 ntBASIC6.84□□□□□ -1.31
RNF43Q68DV7 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 Y_RNA.701-201ENST00000516812 110 ntBASIC6.84□□□□□ -1.31
RNF43Q68DV7 IGLVIV-64-201ENST00000518581 301 ntBASIC6.84□□□□□ -1.31
RNF43Q68DV7 MTCO3P15-201ENST00000526563 574 ntBASIC6.84□□□□□ -1.31
RNF43Q68DV7 OR5AK3P-201ENST00000527486 1297 ntBASIC6.84□□□□□ -1.31
RNF43Q68DV7 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 AC002310.3-201ENST00000569728 723 ntBASIC6.84□□□□□ -1.31
RNF43Q68DV7 AC090286.3-201ENST00000573133 187 ntBASIC6.84□□□□□ -1.31
RNF43Q68DV7 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF43Q68DV7 AC093635.1-201ENST00000609028 555 ntBASIC6.84□□□□□ -1.31
RNF43Q68DV7 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.84□□□□□ -1.31
RNF43Q68DV7 AC018692.2-201ENST00000624130 348 ntBASIC6.84□□□□□ -1.31
RNF43Q68DV7 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 MIR3688-2-201ENST00000636963 87 ntBASIC6.84□□□□□ -1.31
RNF43Q68DV7 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RNF43Q68DV7 MTND5P26-201ENST00000426018 1752 ntBASIC6.84□□□□□ -1.31
RNF43Q68DV7 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF43Q68DV7 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF43Q68DV7 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.84□□□□□ -1.31
RNF43Q68DV7 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.84□□□□□ -1.32
RNF43Q68DV7 EED-206ENST00000527888 1422 ntTSL 2 BASIC6.84□□□□□ -1.32
RNF43Q68DV7 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
RNF43Q68DV7 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.84□□□□□ -1.32
RNF43Q68DV7 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
RNF43Q68DV7 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF43Q68DV7 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF43Q68DV7 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF43Q68DV7 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 AC006511.3-201ENST00000624929 1783 ntBASIC6.83□□□□□ -1.32
RNF43Q68DV7 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF43Q68DV7 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF43Q68DV7 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF43Q68DV7 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 OR10J6P-201ENST00000289731 930 ntBASIC6.83□□□□□ -1.32
RNF43Q68DV7 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF43Q68DV7 Y_RNA.38-201ENST00000362617 102 ntBASIC6.83□□□□□ -1.32
RNF43Q68DV7 RN7SKP78-201ENST00000364711 318 ntBASIC6.83□□□□□ -1.32
RNF43Q68DV7 RNU6-876P-201ENST00000391295 104 ntBASIC6.83□□□□□ -1.32
RNF43Q68DV7 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF43Q68DV7 RNA5SP198-201ENST00000410376 127 ntBASIC6.83□□□□□ -1.32
RNF43Q68DV7 AC002524.1-201ENST00000411687 547 ntBASIC6.83□□□□□ -1.32
RNF43Q68DV7 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 AL359092.1-201ENST00000417156 265 ntBASIC6.83□□□□□ -1.32
RNF43Q68DV7 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 RPS7P12-201ENST00000422385 582 ntBASIC6.83□□□□□ -1.32
RNF43Q68DV7 FABP7P1-201ENST00000424004 391 ntBASIC6.83□□□□□ -1.32
RNF43Q68DV7 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 AC073614.1-201ENST00000438690 650 ntBASIC6.83□□□□□ -1.32
RNF43Q68DV7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 RN7SL413P-201ENST00000482700 297 ntBASIC6.83□□□□□ -1.32
RNF43Q68DV7 RN7SL362P-201ENST00000494228 267 ntBASIC6.83□□□□□ -1.32
RNF43Q68DV7 SNORA58-201ENST00000505219 137 ntBASIC6.83□□□□□ -1.32
RNF43Q68DV7 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 AC090071.1-201ENST00000507713 644 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms