Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 AC022022.1-201ENST00000430304 178 ntBASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 CACYBPP1-201ENST00000438592 684 ntBASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 SCAND3P1-201ENST00000439854 1060 ntBASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 AC073465.2-201ENST00000440938 498 ntBASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 AL389915.2-201ENST00000454576 441 ntBASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 AC092754.1-201ENST00000472975 479 ntBASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 AC023424.1-201ENST00000496058 459 ntBASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 SNRPCP2-201ENST00000504370 475 ntBASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 SEPT10P1-201ENST00000517342 1162 ntBASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 OR10G5P-201ENST00000532733 358 ntBASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 AP002373.2-201ENST00000541631 1060 ntBASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 AC125612.1-201ENST00000547580 377 ntBASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 AL049870.4-201ENST00000555741 486 ntBASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 AC095055.1-201ENST00000603472 1113 ntBASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 AL512283.1-201ENST00000606756 1384 ntBASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 AL139407.1-201ENST00000613826 1175 ntBASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 AC119674.1-212ENST00000641155 993 ntBASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 AL031595.2-201ENST00000624215 19071 ntBASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SNX30Q5VWJ9 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 AL078621.3-201ENST00000623707 2042 ntBASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 CASC19-284ENST00000642142 1868 ntBASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 AC079097.1-201ENST00000512187 1399 ntBASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 OR51A6P-201ENST00000418680 1004 ntBASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 TCEA1P3-201ENST00000443005 880 ntBASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 FAR2P1-206ENST00000449736 709 ntBASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 RN7SL515P-201ENST00000463999 297 ntBASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 AC008953.1-201ENST00000497334 318 ntBASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 RPS4XP20-201ENST00000505751 772 ntBASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 AC010468.3-201ENST00000508225 458 ntBASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 SCARNA20.4-201ENST00000516969 131 ntBASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 OR4A46P-201ENST00000527255 933 ntBASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 AP003049.1-201ENST00000529418 457 ntBASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 AC022832.1-201ENST00000530718 645 ntBASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 AC051619.2-201ENST00000559063 397 ntBASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 AP000769.2-201ENST00000602344 396 ntBASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 AC010632.3-201ENST00000611377 369 ntBASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 AC093775.1-201ENST00000624154 1868 ntBASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX30Q5VWJ9 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 GVINP1-202ENST00000531871 7271 ntBASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 AC092681.1-201ENST00000297369 291 ntBASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 RNU1-19P-201ENST00000363306 165 ntBASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 RNU1-146P-201ENST00000364015 165 ntBASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 SNORD56.6-201ENST00000384569 71 ntBASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 U3.28-201ENST00000391249 210 ntBASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 AL121882.1-201ENST00000422893 417 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms