Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 PRMT5P1-201ENST00000514351 598 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 HPRT1P3-201ENST00000539521 576 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 GTF2IP22-201ENST00000554443 182 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 AC034229.6-201ENST00000623704 224 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 TSHZ2-205ENST00000626626 670 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 MIR6863-201ENST00000636112 90 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 ABBA01000935.2-201ENST00000637477 838 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 SPATA31C2-201ENST00000324915 3777 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 HMGB3P23-201ENST00000414981 585 ntBASIC8.22□□□□□ -1.09
RC3H1Q5TC82 MTND3P17-201ENST00000416968 344 ntBASIC8.22□□□□□ -1.09
RC3H1Q5TC82 AL353729.1-201ENST00000425044 720 ntBASIC8.22□□□□□ -1.09
RC3H1Q5TC82 TIMM9P3-201ENST00000428659 274 ntBASIC8.22□□□□□ -1.09
RC3H1Q5TC82 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 RNU7-140P-201ENST00000459546 60 ntBASIC8.22□□□□□ -1.09
RC3H1Q5TC82 AC007537.2-201ENST00000472093 511 ntBASIC8.22□□□□□ -1.09
RC3H1Q5TC82 AC019235.1-201ENST00000503847 207 ntBASIC8.22□□□□□ -1.09
RC3H1Q5TC82 PSMA2P2-201ENST00000504319 686 ntBASIC8.22□□□□□ -1.09
RC3H1Q5TC82 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 OR4D12P-201ENST00000509361 911 ntBASIC8.22□□□□□ -1.09
RC3H1Q5TC82 RNA5SP271-201ENST00000516700 88 ntBASIC8.22□□□□□ -1.09
RC3H1Q5TC82 RNU6-943P-201ENST00000516960 98 ntBASIC8.22□□□□□ -1.09
RC3H1Q5TC82 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 OTX2-203ENST00000554559 715 ntTSL 5 BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 AL355836.1-201ENST00000555951 870 ntBASIC8.22□□□□□ -1.09
RC3H1Q5TC82 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 AC122134.1-201ENST00000565664 1104 ntBASIC8.22□□□□□ -1.09
RC3H1Q5TC82 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 AC010327.2-201ENST00000587647 488 ntBASIC8.22□□□□□ -1.09
RC3H1Q5TC82 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC8.22□□□□□ -1.09
RC3H1Q5TC82 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 MFSD8-245ENST00000641743 948 ntBASIC8.22□□□□□ -1.09
RC3H1Q5TC82 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RC3H1Q5TC82 MTCO1P25-201ENST00000414449 1799 ntBASIC8.22□□□□□ -1.09
RC3H1Q5TC82 AP005901.5-201ENST00000545779 1796 ntBASIC8.22□□□□□ -1.09
RC3H1Q5TC82 MT-RNR2-201ENST00000387347 1559 ntBASIC8.22□□□□□ -1.09
RC3H1Q5TC82 PABPC1P9-201ENST00000426076 1612 ntBASIC8.21□□□□□ -1.09
RC3H1Q5TC82 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
RC3H1Q5TC82 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
RC3H1Q5TC82 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC8.21□□□□□ -1.09
RC3H1Q5TC82 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
RC3H1Q5TC82 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC8.21□□□□□ -1.09
RC3H1Q5TC82 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
RC3H1Q5TC82 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 MTCO1P11-201ENST00000429111 1528 ntBASIC8.21□□□□□ -1.1
RC3H1Q5TC82 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 MIR606-201ENST00000384851 96 ntBASIC8.21□□□□□ -1.1
RC3H1Q5TC82 MTCO3P40-201ENST00000392516 676 ntBASIC8.21□□□□□ -1.1
RC3H1Q5TC82 AC093719.1-202ENST00000392735 373 ntBASIC8.21□□□□□ -1.1
RC3H1Q5TC82 NRBF2P2-201ENST00000413087 861 ntBASIC8.21□□□□□ -1.1
RC3H1Q5TC82 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 AL161631.1-201ENST00000417933 486 ntBASIC8.21□□□□□ -1.1
RC3H1Q5TC82 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 AC009237.2-201ENST00000421358 284 ntBASIC8.21□□□□□ -1.1
RC3H1Q5TC82 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 OR5AW1P-201ENST00000426334 1006 ntBASIC8.21□□□□□ -1.1
RC3H1Q5TC82 MTND6P12-201ENST00000428247 522 ntBASIC8.21□□□□□ -1.1
RC3H1Q5TC82 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 RPL31P54-201ENST00000429803 370 ntBASIC8.21□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms