Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC38Q502W7 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC38Q502W7 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC38Q502W7 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 AL034549.2-201ENST00000618285 3373 ntBASIC5.75□□□□□ -1.49
CCDC38Q502W7 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 ZNF652P1-201ENST00000442420 1309 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC38Q502W7 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC38Q502W7 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC38Q502W7 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 AL353796.1-201ENST00000561542 3241 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC38Q502W7 RN7SKP275-201ENST00000364626 301 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 SNORA62.2-201ENST00000364672 152 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC38Q502W7 RNU6-207P-201ENST00000384137 107 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC38Q502W7 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 RN7SKP240-201ENST00000410583 375 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 MTCO3P21-201ENST00000430791 643 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 NDUFB4P8-201ENST00000435351 367 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 NANOGP9-201ENST00000439890 892 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 CASP3P1-201ENST00000446037 609 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 PSAT1P4-201ENST00000466500 526 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 RPL21P18-201ENST00000469899 480 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 AC025260.1-201ENST00000548858 430 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 NPM1P47-201ENST00000560843 856 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 SULT1C2P2-201ENST00000562517 294 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 AC093591.2-201ENST00000565254 3843 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 AC092121.1-201ENST00000569452 202 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 AC090666.1-201ENST00000578241 445 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 AC233702.9-201ENST00000581528 203 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 AL158050.2-201ENST00000605336 568 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 AC090607.5-201ENST00000615692 224 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC38Q502W7 AP001962.1-201ENST00000624114 559 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 AC025574.1-201ENST00000554784 1653 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 AL132640.2-201ENST00000559968 1698 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC38Q502W7 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC38Q502W7 THAP12P5-201ENST00000405864 2275 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 AC112198.2-201ENST00000426589 6996 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC38Q502W7 VN2R3P-201ENST00000422626 1412 ntBASIC5.74□□□□□ -1.49
CCDC38Q502W7 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC38Q502W7 AL360270.2-201ENST00000562952 5985 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC38Q502W7 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.73□□□□□ -1.49
CCDC38Q502W7 DDX18P4-201ENST00000511690 1966 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC38Q502W7 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCDC38Q502W7 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC38Q502W7 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC38Q502W7 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC38Q502W7 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCDC38Q502W7 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCDC38Q502W7 RSL24D1P1-201ENST00000404972 493 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 RNA5SP296-201ENST00000410523 111 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 AC013404.1-201ENST00000413068 249 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 RPS6P23-201ENST00000413224 722 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC38Q502W7 UBE2V1P9-201ENST00000414760 368 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 LINC01881-201ENST00000416103 412 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 AC073310.1-201ENST00000423226 1033 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.73□□□□□ -1.49
CCDC38Q502W7 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC38Q502W7 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC38Q502W7 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms