Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.9□□□□□ -1.47
RFX7Q2KHR2 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.9□□□□□ -1.47
RFX7Q2KHR2 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.9□□□□□ -1.47
RFX7Q2KHR2 C1GALT1P3-201ENST00000522049 819 ntBASIC5.9□□□□□ -1.47
RFX7Q2KHR2 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.9□□□□□ -1.47
RFX7Q2KHR2 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.9□□□□□ -1.47
RFX7Q2KHR2 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.9□□□□□ -1.47
RFX7Q2KHR2 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RFX7Q2KHR2 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RFX7Q2KHR2 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RFX7Q2KHR2 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RFX7Q2KHR2 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RFX7Q2KHR2 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RFX7Q2KHR2 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
RFX7Q2KHR2 AL132640.2-201ENST00000559968 1698 ntBASIC5.89□□□□□ -1.47
RFX7Q2KHR2 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFX7Q2KHR2 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.89□□□□□ -1.47
RFX7Q2KHR2 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.89□□□□□ -1.47
RFX7Q2KHR2 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RFX7Q2KHR2 GLUD1P9-201ENST00000420997 1173 ntBASIC5.89□□□□□ -1.47
RFX7Q2KHR2 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.89□□□□□ -1.47
RFX7Q2KHR2 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFX7Q2KHR2 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFX7Q2KHR2 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.89□□□□□ -1.47
RFX7Q2KHR2 RHEBP2-201ENST00000450289 600 ntBASIC5.89□□□□□ -1.47
RFX7Q2KHR2 AC010733.1-201ENST00000451515 401 ntBASIC5.89□□□□□ -1.47
RFX7Q2KHR2 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
RFX7Q2KHR2 RN7SL205P-201ENST00000490174 284 ntBASIC5.89□□□□□ -1.47
RFX7Q2KHR2 AC069304.1-201ENST00000491593 704 ntBASIC5.89□□□□□ -1.47
RFX7Q2KHR2 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.89□□□□□ -1.47
RFX7Q2KHR2 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.89□□□□□ -1.47
RFX7Q2KHR2 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.89□□□□□ -1.47
RFX7Q2KHR2 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.89□□□□□ -1.47
RFX7Q2KHR2 AP001880.2-201ENST00000538233 448 ntBASIC5.89□□□□□ -1.47
RFX7Q2KHR2 CYCSP40-201ENST00000575927 294 ntBASIC5.89□□□□□ -1.47
RFX7Q2KHR2 RN7SL52P-201ENST00000584271 284 ntBASIC5.89□□□□□ -1.47
RFX7Q2KHR2 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.89□□□□□ -1.47
RFX7Q2KHR2 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.89□□□□□ -1.47
RFX7Q2KHR2 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.89□□□□□ -1.47
RFX7Q2KHR2 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.89□□□□□ -1.47
RFX7Q2KHR2 AC016590.3-201ENST00000611171 753 ntBASIC5.89□□□□□ -1.47
RFX7Q2KHR2 RN7SL722P-201ENST00000617780 284 ntBASIC5.89□□□□□ -1.47
RFX7Q2KHR2 RN7SL565P-201ENST00000618246 284 ntBASIC5.89□□□□□ -1.47
RFX7Q2KHR2 AL022401.1-201ENST00000619498 108 ntBASIC5.89□□□□□ -1.47
RFX7Q2KHR2 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFX7Q2KHR2 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFX7Q2KHR2 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.88□□□□□ -1.47
RFX7Q2KHR2 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFX7Q2KHR2 AC063976.2-201ENST00000425667 3556 ntBASIC5.88□□□□□ -1.47
RFX7Q2KHR2 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFX7Q2KHR2 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFX7Q2KHR2 AC114755.2-201ENST00000413520 361 ntBASIC5.88□□□□□ -1.47
RFX7Q2KHR2 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.88□□□□□ -1.47
RFX7Q2KHR2 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.88□□□□□ -1.47
RFX7Q2KHR2 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.88□□□□□ -1.47
RFX7Q2KHR2 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.88□□□□□ -1.47
RFX7Q2KHR2 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.88□□□□□ -1.47
RFX7Q2KHR2 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.88□□□□□ -1.47
RFX7Q2KHR2 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
RFX7Q2KHR2 RN7SL802P-201ENST00000577858 299 ntBASIC5.88□□□□□ -1.47
RFX7Q2KHR2 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFX7Q2KHR2 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFX7Q2KHR2 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.88□□□□□ -1.47
RFX7Q2KHR2 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.88□□□□□ -1.47
RFX7Q2KHR2 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.88□□□□□ -1.47
RFX7Q2KHR2 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.88□□□□□ -1.47
RFX7Q2KHR2 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
RFX7Q2KHR2 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
RFX7Q2KHR2 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.87□□□□□ -1.47
RFX7Q2KHR2 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.87□□□□□ -1.47
RFX7Q2KHR2 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.87□□□□□ -1.47
RFX7Q2KHR2 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
RFX7Q2KHR2 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFX7Q2KHR2 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFX7Q2KHR2 AL138820.1-201ENST00000617901 5305 ntBASIC5.87□□□□□ -1.47
RFX7Q2KHR2 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFX7Q2KHR2 AC010132.2-201ENST00000295493 1043 ntBASIC5.87□□□□□ -1.47
RFX7Q2KHR2 AC008549.2-201ENST00000333482 706 ntBASIC5.87□□□□□ -1.47
RFX7Q2KHR2 RNA5SP332-201ENST00000391063 115 ntBASIC5.87□□□□□ -1.47
RFX7Q2KHR2 RNU2-50P-201ENST00000410494 143 ntBASIC5.87□□□□□ -1.47
RFX7Q2KHR2 LINC00993-201ENST00000420453 540 ntBASIC5.87□□□□□ -1.47
RFX7Q2KHR2 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.87□□□□□ -1.47
RFX7Q2KHR2 AL645608.4-201ENST00000423619 154 ntBASIC5.87□□□□□ -1.47
RFX7Q2KHR2 AL136455.1-201ENST00000441083 1240 ntBASIC5.87□□□□□ -1.47
RFX7Q2KHR2 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.87□□□□□ -1.47
RFX7Q2KHR2 AL672167.3-201ENST00000465951 960 ntBASIC5.87□□□□□ -1.47
RFX7Q2KHR2 RPL23AP72-201ENST00000492447 435 ntBASIC5.87□□□□□ -1.47
RFX7Q2KHR2 RN7SL558P-201ENST00000497468 299 ntBASIC5.87□□□□□ -1.47
RFX7Q2KHR2 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.87□□□□□ -1.47
RFX7Q2KHR2 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.87□□□□□ -1.47
RFX7Q2KHR2 BUD31P1-201ENST00000521828 359 ntBASIC5.87□□□□□ -1.47
RFX7Q2KHR2 OR5M2P-201ENST00000529003 936 ntBASIC5.87□□□□□ -1.47
RFX7Q2KHR2 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.87□□□□□ -1.47
RFX7Q2KHR2 LSM3P2-201ENST00000551246 273 ntBASIC5.87□□□□□ -1.47
RFX7Q2KHR2 AL049839.1-201ENST00000556151 657 ntBASIC5.87□□□□□ -1.47
RFX7Q2KHR2 AP000919.1-201ENST00000582850 985 ntBASIC5.87□□□□□ -1.47
RFX7Q2KHR2 AC098935.2-201ENST00000604222 466 ntBASIC5.87□□□□□ -1.47
RFX7Q2KHR2 AC243960.7-201ENST00000623532 707 ntBASIC5.87□□□□□ -1.47
RFX7Q2KHR2 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.87□□□□□ -1.47
RFX7Q2KHR2 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms