Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.73□□□□□ -1.49
CCNA1P78396 MIR6839-201ENST00000620425 113 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
CCNA1P78396 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCNA1P78396 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCNA1P78396 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCNA1P78396 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCNA1P78396 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCNA1P78396 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.73□□□□□ -1.49
CCNA1P78396 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
CCNA1P78396 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCNA1P78396 AC092451.3-201ENST00000625067 1343 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 AC016745.2-201ENST00000608834 3443 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.72□□□□□ -1.49
CCNA1P78396 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCNA1P78396 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCNA1P78396 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCNA1P78396 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCNA1P78396 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
CCNA1P78396 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CCNA1P78396 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.72□□□□□ -1.49
CCNA1P78396 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.72□□□□□ -1.49
CCNA1P78396 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.72□□□□□ -1.49
CCNA1P78396 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CCNA1P78396 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCNA1P78396 AL356967.1-201ENST00000406305 431 ntBASIC5.72□□□□□ -1.49
CCNA1P78396 MRPS21P2-201ENST00000424704 264 ntBASIC5.72□□□□□ -1.49
CCNA1P78396 NRBF2P3-201ENST00000432731 865 ntBASIC5.72□□□□□ -1.49
CCNA1P78396 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.72□□□□□ -1.49
CCNA1P78396 RPL19P16-201ENST00000433839 588 ntBASIC5.72□□□□□ -1.49
CCNA1P78396 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.72□□□□□ -1.49
CCNA1P78396 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.72□□□□□ -1.49
CCNA1P78396 AC010326.1-201ENST00000462726 602 ntBASIC5.72□□□□□ -1.49
CCNA1P78396 RN7SL197P-201ENST00000466981 299 ntBASIC5.72□□□□□ -1.49
CCNA1P78396 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.72□□□□□ -1.49
CCNA1P78396 AC034205.1-201ENST00000520621 638 ntBASIC5.72□□□□□ -1.49
CCNA1P78396 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCNA1P78396 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.72□□□□□ -1.49
CCNA1P78396 AP001880.2-201ENST00000538233 448 ntBASIC5.72□□□□□ -1.49
CCNA1P78396 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.72□□□□□ -1.49
CCNA1P78396 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.72□□□□□ -1.49
CCNA1P78396 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.72□□□□□ -1.49
CCNA1P78396 AC096586.2-201ENST00000610260 441 ntBASIC5.72□□□□□ -1.49
CCNA1P78396 CR381572.2-201ENST00000624852 397 ntBASIC5.72□□□□□ -1.49
CCNA1P78396 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.72□□□□□ -1.49
CCNA1P78396 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CCNA1P78396 AL022322.2-201ENST00000624072 20397 ntBASIC5.72□□□□□ -1.49
CCNA1P78396 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCNA1P78396 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.72□□□□□ -1.49
CCNA1P78396 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
CCNA1P78396 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCNA1P78396 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.72□□□□□ -1.49
CCNA1P78396 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCNA1P78396 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.72□□□□□ -1.49
CCNA1P78396 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCNA1P78396 AC019072.1-201ENST00000604535 1551 ntBASIC5.72□□□□□ -1.49
CCNA1P78396 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCNA1P78396 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
CCNA1P78396 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
CCNA1P78396 AC015813.6-201ENST00000624409 5808 ntBASIC5.71□□□□□ -1.49
CCNA1P78396 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCNA1P78396 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCNA1P78396 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.71□□□□□ -1.5
CCNA1P78396 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCNA1P78396 ATP5HP3-201ENST00000396994 486 ntBASIC5.71□□□□□ -1.5
CCNA1P78396 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.71□□□□□ -1.5
CCNA1P78396 AC069213.2-201ENST00000420238 366 ntBASIC5.71□□□□□ -1.5
CCNA1P78396 AC099670.2-201ENST00000435130 321 ntBASIC5.71□□□□□ -1.5
CCNA1P78396 RPSAP41-201ENST00000439695 860 ntBASIC5.71□□□□□ -1.5
CCNA1P78396 AC234781.3-201ENST00000452540 973 ntBASIC5.71□□□□□ -1.5
CCNA1P78396 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.71□□□□□ -1.5
CCNA1P78396 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCNA1P78396 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.71□□□□□ -1.5
CCNA1P78396 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.71□□□□□ -1.5
CCNA1P78396 AC098976.1-201ENST00000513014 541 ntBASIC5.71□□□□□ -1.5
CCNA1P78396 RN7SKP92-201ENST00000517266 244 ntBASIC5.71□□□□□ -1.5
CCNA1P78396 AL512310.9-201ENST00000553311 948 ntBASIC5.71□□□□□ -1.5
CCNA1P78396 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.71□□□□□ -1.5
CCNA1P78396 AC021106.3-201ENST00000623925 531 ntBASIC5.71□□□□□ -1.5
CCNA1P78396 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.71□□□□□ -1.5
CCNA1P78396 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCNA1P78396 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.71□□□□□ -1.5
CCNA1P78396 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCNA1P78396 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCNA1P78396 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCNA1P78396 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CCNA1P78396 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.7□□□□□ -1.5
CCNA1P78396 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.7□□□□□ -1.5
CCNA1P78396 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCNA1P78396 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCNA1P78396 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
CCNA1P78396 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.7□□□□□ -1.5
CCNA1P78396 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.7□□□□□ -1.5
CCNA1P78396 RNA5SP332-201ENST00000391063 115 ntBASIC5.7□□□□□ -1.5
CCNA1P78396 AL354868.1-201ENST00000417077 482 ntBASIC5.7□□□□□ -1.5
CCNA1P78396 COX6CP13-201ENST00000428703 226 ntBASIC5.7□□□□□ -1.5
CCNA1P78396 CNOT7P1-201ENST00000429006 852 ntBASIC5.7□□□□□ -1.5
CCNA1P78396 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.7□□□□□ -1.5
CCNA1P78396 VDAC1P6-201ENST00000430062 855 ntBASIC5.7□□□□□ -1.5
CCNA1P78396 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms