Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.43□□□□□ -1.54
CLRN1P58418 RNA5SP441-201ENST00000516809 88 ntBASIC5.43□□□□□ -1.54
CLRN1P58418 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.43□□□□□ -1.54
CLRN1P58418 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.43□□□□□ -1.54
CLRN1P58418 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.43□□□□□ -1.54
CLRN1P58418 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.43□□□□□ -1.54
CLRN1P58418 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.43□□□□□ -1.54
CLRN1P58418 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.43□□□□□ -1.54
CLRN1P58418 AC008126.1-201ENST00000549019 480 ntBASIC5.43□□□□□ -1.54
CLRN1P58418 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.43□□□□□ -1.54
CLRN1P58418 MIR548Y-201ENST00000582739 110 ntBASIC5.43□□□□□ -1.54
CLRN1P58418 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.43□□□□□ -1.54
CLRN1P58418 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.43□□□□□ -1.54
CLRN1P58418 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.43□□□□□ -1.54
CLRN1P58418 AC092681.3-201ENST00000609463 678 ntBASIC5.43□□□□□ -1.54
CLRN1P58418 AP000254.1-201ENST00000609934 520 ntBASIC5.43□□□□□ -1.54
CLRN1P58418 AC104073.3-201ENST00000610942 955 ntBASIC5.43□□□□□ -1.54
CLRN1P58418 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLRN1P58418 AL359715.5-201ENST00000623431 443 ntBASIC5.43□□□□□ -1.54
CLRN1P58418 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.43□□□□□ -1.54
CLRN1P58418 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.43□□□□□ -1.54
CLRN1P58418 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLRN1P58418 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLRN1P58418 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
CLRN1P58418 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
CLRN1P58418 AC100871.1-201ENST00000507871 1456 ntBASIC5.43□□□□□ -1.54
CLRN1P58418 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.43□□□□□ -1.54
CLRN1P58418 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.43□□□□□ -1.54
CLRN1P58418 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLRN1P58418 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLRN1P58418 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLRN1P58418 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CLRN1P58418 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
CLRN1P58418 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CLRN1P58418 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLRN1P58418 AP002512.4-202ENST00000641599 4530 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CLRN1P58418 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CLRN1P58418 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLRN1P58418 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CLRN1P58418 AL355852.1-201ENST00000454081 1771 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLRN1P58418 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
CLRN1P58418 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CLRN1P58418 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLRN1P58418 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CLRN1P58418 AC023490.2-201ENST00000359859 470 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 RNU6-1339P-201ENST00000363574 91 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 RNU6-98P-201ENST00000384173 107 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 Y_RNA.559-201ENST00000384686 107 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 AL132875.1-201ENST00000403623 949 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 AL031577.2-201ENST00000404133 280 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 AL096800.1-201ENST00000405326 893 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 NRBF2P2-201ENST00000413087 861 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 MTCO3P41-201ENST00000414801 328 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 PTP4A1P1-201ENST00000420539 515 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 AL139158.1-201ENST00000424719 340 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLRN1P58418 AC099782.1-201ENST00000425889 474 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 AL354707.3-201ENST00000427308 331 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.42□□□□□ -1.54
CLRN1P58418 USP9YP31-201ENST00000431405 881 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC5.42□□□□□ -1.54
CLRN1P58418 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.42□□□□□ -1.54
CLRN1P58418 AC009263.1-201ENST00000441193 1239 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC5.42□□□□□ -1.54
CLRN1P58418 RPL12P26-201ENST00000452430 487 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.42□□□□□ -1.54
CLRN1P58418 USP9YP10-201ENST00000454868 628 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.42□□□□□ -1.54
CLRN1P58418 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.42□□□□□ -1.54
CLRN1P58418 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.42□□□□□ -1.54
CLRN1P58418 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.42□□□□□ -1.54
CLRN1P58418 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.42□□□□□ -1.54
CLRN1P58418 AF213884.2-201ENST00000510417 903 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 USP9YP5-201ENST00000511770 630 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 MAST4-IT1-201ENST00000514241 658 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 AC116917.1-201ENST00000520558 305 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLRN1P58418 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.42□□□□□ -1.54
CLRN1P58418 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.42□□□□□ -1.54
CLRN1P58418 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.42□□□□□ -1.54
CLRN1P58418 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLRN1P58418 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.42□□□□□ -1.54
CLRN1P58418 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.42□□□□□ -1.54
CLRN1P58418 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.42□□□□□ -1.54
CLRN1P58418 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.42□□□□□ -1.54
CLRN1P58418 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.42□□□□□ -1.54
CLRN1P58418 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.42□□□□□ -1.54
CLRN1P58418 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.42□□□□□ -1.54
CLRN1P58418 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.42□□□□□ -1.54
CLRN1P58418 AF131215.7-201ENST00000602443 707 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 AL135999.3-201ENST00000610501 812 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 AL356274.1-201ENST00000617064 410 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.42□□□□□ -1.54
CLRN1P58418 AC069234.4-201ENST00000621276 412 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 AL392088.2-201ENST00000637607 285 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CLRN1P58418 NCLP2-201ENST00000416078 1462 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 193.2 ms