Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC004817.4-201ENST00000602396 3625 ntBASIC4.77□□□□□ -1.65
VSX2P58304 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
VSX2P58304 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.77□□□□□ -1.65
VSX2P58304 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
VSX2P58304 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
VSX2P58304 IRF5P1-201ENST00000504852 2164 ntBASIC4.77□□□□□ -1.65
VSX2P58304 MIPEPP2-201ENST00000422560 1819 ntBASIC4.77□□□□□ -1.65
VSX2P58304 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.77□□□□□ -1.65
VSX2P58304 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
VSX2P58304 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VSX2P58304 U3.32-201ENST00000408116 212 ntBASIC4.77□□□□□ -1.65
VSX2P58304 RPS26P13-201ENST00000419030 330 ntBASIC4.77□□□□□ -1.65
VSX2P58304 OR2AM1P-201ENST00000422137 422 ntBASIC4.77□□□□□ -1.65
VSX2P58304 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.77□□□□□ -1.65
VSX2P58304 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.77□□□□□ -1.65
VSX2P58304 RPS29P9-201ENST00000440360 171 ntBASIC4.77□□□□□ -1.65
VSX2P58304 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
VSX2P58304 AC112498.1-201ENST00000444401 332 ntBASIC4.77□□□□□ -1.65
VSX2P58304 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.77□□□□□ -1.65
VSX2P58304 HIGD1AP8-201ENST00000453927 274 ntBASIC4.77□□□□□ -1.65
VSX2P58304 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.77□□□□□ -1.65
VSX2P58304 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.77□□□□□ -1.65
VSX2P58304 HMGB1P4-201ENST00000455362 567 ntBASIC4.77□□□□□ -1.65
VSX2P58304 AC021660.1-201ENST00000465006 554 ntBASIC4.77□□□□□ -1.65
VSX2P58304 RN7SL441P-201ENST00000492388 296 ntBASIC4.77□□□□□ -1.65
VSX2P58304 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.77□□□□□ -1.65
VSX2P58304 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.77□□□□□ -1.65
VSX2P58304 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.77□□□□□ -1.65
VSX2P58304 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.77□□□□□ -1.65
VSX2P58304 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.77□□□□□ -1.65
VSX2P58304 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.77□□□□□ -1.65
VSX2P58304 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.77□□□□□ -1.65
VSX2P58304 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VSX2P58304 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
VSX2P58304 AC000374.1-201ENST00000434698 1745 ntBASIC4.77□□□□□ -1.65
VSX2P58304 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
VSX2P58304 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VSX2P58304 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VSX2P58304 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VSX2P58304 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
VSX2P58304 MTCO1P15-201ENST00000529569 1526 ntBASIC4.77□□□□□ -1.65
VSX2P58304 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.77□□□□□ -1.65
VSX2P58304 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VSX2P58304 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VSX2P58304 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.76□□□□□ -1.65
VSX2P58304 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VSX2P58304 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
VSX2P58304 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VSX2P58304 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
VSX2P58304 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
VSX2P58304 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VSX2P58304 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VSX2P58304 ATP5HP3-201ENST00000396994 486 ntBASIC4.76□□□□□ -1.65
VSX2P58304 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.76□□□□□ -1.65
VSX2P58304 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.76□□□□□ -1.65
VSX2P58304 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.76□□□□□ -1.65
VSX2P58304 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.76□□□□□ -1.65
VSX2P58304 NPM1P48-201ENST00000436002 853 ntBASIC4.76□□□□□ -1.65
VSX2P58304 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.76□□□□□ -1.65
VSX2P58304 MRPS33P2-201ENST00000507850 322 ntBASIC4.76□□□□□ -1.65
VSX2P58304 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.76□□□□□ -1.65
VSX2P58304 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.76□□□□□ -1.65
VSX2P58304 RFPL4AP5-201ENST00000514977 504 ntBASIC4.76□□□□□ -1.65
VSX2P58304 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.76□□□□□ -1.65
VSX2P58304 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
VSX2P58304 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.76□□□□□ -1.65
VSX2P58304 MIR4700-201ENST00000578311 74 ntBASIC4.76□□□□□ -1.65
VSX2P58304 MIR3934-201ENST00000579806 107 ntBASIC4.76□□□□□ -1.65
VSX2P58304 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.76□□□□□ -1.65
VSX2P58304 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.76□□□□□ -1.65
VSX2P58304 AC018695.5-201ENST00000605872 315 ntBASIC4.76□□□□□ -1.65
VSX2P58304 AC116651.1-201ENST00000609724 556 ntBASIC4.76□□□□□ -1.65
VSX2P58304 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
VSX2P58304 AC019206.1-201ENST00000621938 425 ntBASIC4.76□□□□□ -1.65
VSX2P58304 AC112694.2-201ENST00000623697 768 ntBASIC4.76□□□□□ -1.65
VSX2P58304 AP001642.1-201ENST00000624727 2117 ntBASIC4.76□□□□□ -1.65
VSX2P58304 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.76□□□□□ -1.65
VSX2P58304 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.76□□□□□ -1.65
VSX2P58304 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.76□□□□□ -1.65
VSX2P58304 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.76□□□□□ -1.65
VSX2P58304 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VSX2P58304 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.75□□□□□ -1.65
VSX2P58304 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VSX2P58304 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VSX2P58304 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
VSX2P58304 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VSX2P58304 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VSX2P58304 AL136116.2-201ENST00000404020 785 ntBASIC4.75□□□□□ -1.65
VSX2P58304 COX5BP7-201ENST00000414780 274 ntBASIC4.75□□□□□ -1.65
VSX2P58304 COX6B1P1-201ENST00000415962 213 ntBASIC4.75□□□□□ -1.65
VSX2P58304 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.75□□□□□ -1.65
VSX2P58304 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.75□□□□□ -1.65
VSX2P58304 AL691482.1-201ENST00000453255 87 ntBASIC4.75□□□□□ -1.65
VSX2P58304 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.75□□□□□ -1.65
VSX2P58304 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.75□□□□□ -1.65
VSX2P58304 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.75□□□□□ -1.65
VSX2P58304 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.75□□□□□ -1.65
VSX2P58304 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.75□□□□□ -1.65
VSX2P58304 BTF3P13-201ENST00000513224 490 ntBASIC4.75□□□□□ -1.65
VSX2P58304 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms