Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RNF144AP50876 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RNF144AP50876 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.92□□□□□ -1.3
RNF144AP50876 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RNF144AP50876 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RNF144AP50876 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RNF144AP50876 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.91□□□□□ -1.3
RNF144AP50876 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
RNF144AP50876 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
RNF144AP50876 MTCO1P12-201ENST00000414273 1543 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RNF144AP50876 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
RNF144AP50876 SPATA31C1-201ENST00000420021 3895 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
RNF144AP50876 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF144AP50876 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
RNF144AP50876 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
RNF144AP50876 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
RNF144AP50876 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF144AP50876 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RNF144AP50876 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.91□□□□□ -1.3
RNF144AP50876 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
RNF144AP50876 AL078621.1-201ENST00000272567 768 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 RNU6-505P-201ENST00000384427 107 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 AL353151.1-201ENST00000402406 604 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 AL136133.1-201ENST00000413694 376 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 GNAI2P2-201ENST00000417003 916 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF144AP50876 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC6.91□□□□□ -1.3
RNF144AP50876 LYPLA1P1-201ENST00000434514 622 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 BNIP3P2-201ENST00000441221 577 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 HSPE1P28-201ENST00000443139 211 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC6.91□□□□□ -1.3
RNF144AP50876 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.91□□□□□ -1.3
RNF144AP50876 OR7E62P-201ENST00000456741 477 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 RN7SL233P-201ENST00000469988 277 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 GLRXP3-201ENST00000470810 321 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 AC015820.1-201ENST00000473882 321 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC6.91□□□□□ -1.3
RNF144AP50876 RN7SL338P-201ENST00000481467 293 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 RN7SL332P-201ENST00000482163 254 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 KLHL2P1-201ENST00000508691 521 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 AC106774.2-201ENST00000510266 406 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 OR51A1P-201ENST00000511110 946 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.91□□□□□ -1.3
RNF144AP50876 OR52H2P-201ENST00000514607 902 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 AC105417.1-201ENST00000514691 285 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 IGHV3-63-201ENST00000518422 341 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 TPM3P3-201ENST00000521343 354 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 AP003181.2-201ENST00000528941 181 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC6.91□□□□□ -1.3
RNF144AP50876 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.91□□□□□ -1.3
RNF144AP50876 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC6.91□□□□□ -1.3
RNF144AP50876 AC079075.1-201ENST00000559543 878 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 FRG2DP-202ENST00000566967 323 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 MIR4642-201ENST00000583943 82 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 BOLA2P1-201ENST00000584794 232 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RNF144AP50876 ANKRD20A19P-203ENST00000602724 295 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 DPPA3P3-201ENST00000603842 430 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 AC115621.1-201ENST00000604653 858 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 AC009597.2-201ENST00000604659 592 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 RNU6-87P-201ENST00000607561 108 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 AP004247.4-201ENST00000608484 942 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 AC084781.2-201ENST00000615568 161 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC6.91□□□□□ -1.3
RNF144AP50876 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF144AP50876 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF144AP50876 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF144AP50876 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
RNF144AP50876 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RNF144AP50876 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RNF144AP50876 CTAGE11P-201ENST00000451540 2353 ntBASIC6.91□□□□□ -1.3
RNF144AP50876 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF144AP50876 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF144AP50876 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF144AP50876 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF144AP50876 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RNF144AP50876 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RNF144AP50876 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF144AP50876 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RNF144AP50876 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF144AP50876 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
RNF144AP50876 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
RNF144AP50876 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF144AP50876 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RNF144AP50876 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.9□□□□□ -1.3
RNF144AP50876 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
RNF144AP50876 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RNF144AP50876 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF144AP50876 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
RNF144AP50876 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RNF144AP50876 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF144AP50876 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF144AP50876 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RNF144AP50876 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC6.9□□□□□ -1.3
RNF144AP50876 MIR1305-201ENST00000408300 86 ntBASIC6.9□□□□□ -1.3
RNF144AP50876 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF144AP50876 AC023347.2-201ENST00000433994 462 ntBASIC6.9□□□□□ -1.3
RNF144AP50876 AL627308.1-201ENST00000435693 821 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms