Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.56□□□□□ -1.52
CD40P25942 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.56□□□□□ -1.52
CD40P25942 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CD40P25942 EIF4A2P5-201ENST00000529914 499 ntBASIC5.56□□□□□ -1.52
CD40P25942 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.56□□□□□ -1.52
CD40P25942 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.56□□□□□ -1.52
CD40P25942 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.56□□□□□ -1.52
CD40P25942 TRAV15-201ENST00000556680 249 ntBASIC5.56□□□□□ -1.52
CD40P25942 AL512347.1-201ENST00000566420 503 ntBASIC5.56□□□□□ -1.52
CD40P25942 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.56□□□□□ -1.52
CD40P25942 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.56□□□□□ -1.52
CD40P25942 AC115085.1-201ENST00000588924 229 ntBASIC5.56□□□□□ -1.52
CD40P25942 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.56□□□□□ -1.52
CD40P25942 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.56□□□□□ -1.52
CD40P25942 AC006338.2-201ENST00000616864 791 ntBASIC5.56□□□□□ -1.52
CD40P25942 AL590240.3-201ENST00000621416 943 ntBASIC5.56□□□□□ -1.52
CD40P25942 AL450226.2-201ENST00000622913 439 ntBASIC5.56□□□□□ -1.52
CD40P25942 AP001052.1-201ENST00000626421 99 ntBASIC5.56□□□□□ -1.52
CD40P25942 SAMMSON-209ENST00000641222 1100 ntBASIC5.56□□□□□ -1.52
CD40P25942 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CD40P25942 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CD40P25942 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.56□□□□□ -1.52
CD40P25942 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CD40P25942 CDR1-202ENST00000625883 1485 ntBASIC5.56□□□□□ -1.52
CD40P25942 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.56□□□□□ -1.52
CD40P25942 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CD40P25942 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CD40P25942 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CD40P25942 DBF4P1-201ENST00000412976 1892 ntBASIC5.56□□□□□ -1.52
CD40P25942 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CD40P25942 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.55□□□□□ -1.52
CD40P25942 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CD40P25942 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD40P25942 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CD40P25942 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.55□□□□□ -1.52
CD40P25942 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.55□□□□□ -1.52
CD40P25942 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC5.55□□□□□ -1.52
CD40P25942 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD40P25942 WDR95P-201ENST00000425638 1542 ntBASIC5.55□□□□□ -1.52
CD40P25942 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CD40P25942 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CD40P25942 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD40P25942 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD40P25942 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.55□□□□□ -1.52
CD40P25942 MFSD8-219ENST00000641228 2559 ntBASIC5.55□□□□□ -1.52
CD40P25942 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD40P25942 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD40P25942 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD40P25942 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD40P25942 RNU6-1151P-201ENST00000384684 107 ntBASIC5.55□□□□□ -1.52
CD40P25942 AL589647.1-201ENST00000402485 466 ntBASIC5.55□□□□□ -1.52
CD40P25942 AL139805.1-201ENST00000407837 289 ntBASIC5.55□□□□□ -1.52
CD40P25942 MIR1284-201ENST00000408337 120 ntBASIC5.55□□□□□ -1.52
CD40P25942 IPPKP1-201ENST00000422501 768 ntBASIC5.55□□□□□ -1.52
CD40P25942 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.55□□□□□ -1.52
CD40P25942 OR5BE1P-201ENST00000425977 939 ntBASIC5.55□□□□□ -1.52
CD40P25942 AC108479.1-201ENST00000431142 427 ntBASIC5.55□□□□□ -1.52
CD40P25942 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.55□□□□□ -1.52
CD40P25942 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.55□□□□□ -1.52
CD40P25942 PCNPP2-201ENST00000441651 455 ntBASIC5.55□□□□□ -1.52
CD40P25942 RAB11AP1-201ENST00000442978 646 ntBASIC5.55□□□□□ -1.52
CD40P25942 CXCR2P1-202ENST00000443392 1074 ntBASIC5.55□□□□□ -1.52
CD40P25942 AC023271.1-201ENST00000445936 1090 ntBASIC5.55□□□□□ -1.52
CD40P25942 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.55□□□□□ -1.52
CD40P25942 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.55□□□□□ -1.52
CD40P25942 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC5.55□□□□□ -1.52
CD40P25942 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC5.55□□□□□ -1.52
CD40P25942 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.55□□□□□ -1.52
CD40P25942 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.55□□□□□ -1.52
CD40P25942 AC079841.1-201ENST00000481228 950 ntBASIC5.55□□□□□ -1.52
CD40P25942 RPL7P38-201ENST00000488396 739 ntBASIC5.55□□□□□ -1.52
CD40P25942 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.55□□□□□ -1.52
CD40P25942 SNORA58-201ENST00000505219 137 ntBASIC5.55□□□□□ -1.52
CD40P25942 AC004069.2-201ENST00000505438 1114 ntBASIC5.55□□□□□ -1.52
CD40P25942 AC091874.2-201ENST00000505889 720 ntBASIC5.55□□□□□ -1.52
CD40P25942 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.55□□□□□ -1.52
CD40P25942 AF279873.1-201ENST00000523393 313 ntBASIC5.55□□□□□ -1.52
CD40P25942 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.55□□□□□ -1.52
CD40P25942 AC084121.1-201ENST00000533882 835 ntBASIC5.55□□□□□ -1.52
CD40P25942 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD40P25942 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.55□□□□□ -1.52
CD40P25942 AL358913.1-201ENST00000554342 121 ntBASIC5.55□□□□□ -1.52
CD40P25942 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.55□□□□□ -1.52
CD40P25942 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CD40P25942 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.55□□□□□ -1.52
CD40P25942 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.55□□□□□ -1.52
CD40P25942 NMNAT1P5-201ENST00000559657 841 ntBASIC5.55□□□□□ -1.52
CD40P25942 ZNF415P1-201ENST00000582279 1166 ntBASIC5.55□□□□□ -1.52
CD40P25942 AC090616.1-201ENST00000583895 447 ntBASIC5.55□□□□□ -1.52
CD40P25942 AC008507.1-201ENST00000587506 734 ntBASIC5.55□□□□□ -1.52
CD40P25942 VN1R92P-201ENST00000598511 928 ntBASIC5.55□□□□□ -1.52
CD40P25942 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.55□□□□□ -1.52
CD40P25942 AC020765.1-201ENST00000604296 328 ntBASIC5.55□□□□□ -1.52
CD40P25942 AC005332.10-201ENST00000612725 619 ntBASIC5.55□□□□□ -1.52
CD40P25942 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.55□□□□□ -1.52
CD40P25942 AC243756.2-201ENST00000618406 463 ntBASIC5.55□□□□□ -1.52
CD40P25942 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CD40P25942 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
CD40P25942 OR5BE1P-202ENST00000641168 1176 ntBASIC5.55□□□□□ -1.52
CD40P25942 AKAP17BP-201ENST00000431706 2719 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms