Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC009963.2-201ENST00000453431 138 ntBASIC5.4□□□□□ -1.54
COL11A1P12107 RPL10P17-201ENST00000453852 316 ntBASIC5.4□□□□□ -1.54
COL11A1P12107 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.4□□□□□ -1.54
COL11A1P12107 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.4□□□□□ -1.54
COL11A1P12107 AK3P4-201ENST00000504283 583 ntBASIC5.4□□□□□ -1.54
COL11A1P12107 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.4□□□□□ -1.54
COL11A1P12107 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.4□□□□□ -1.54
COL11A1P12107 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.4□□□□□ -1.54
COL11A1P12107 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.4□□□□□ -1.54
COL11A1P12107 AC125494.2-201ENST00000602431 657 ntBASIC5.4□□□□□ -1.54
COL11A1P12107 AL121932.1-201ENST00000605542 214 ntBASIC5.4□□□□□ -1.54
COL11A1P12107 AC100847.1-201ENST00000611316 481 ntBASIC5.4□□□□□ -1.54
COL11A1P12107 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL11A1P12107 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL11A1P12107 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL11A1P12107 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL11A1P12107 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.4□□□□□ -1.55
COL11A1P12107 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL11A1P12107 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL11A1P12107 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.39□□□□□ -1.55
COL11A1P12107 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL11A1P12107 IGKV7-3-201ENST00000357453 298 ntBASIC5.39□□□□□ -1.55
COL11A1P12107 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL11A1P12107 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
COL11A1P12107 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.39□□□□□ -1.55
COL11A1P12107 UQCRBP1-201ENST00000421129 336 ntBASIC5.39□□□□□ -1.55
COL11A1P12107 AL592293.2-201ENST00000422292 996 ntBASIC5.39□□□□□ -1.55
COL11A1P12107 AC006065.1-201ENST00000422539 802 ntBASIC5.39□□□□□ -1.55
COL11A1P12107 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.39□□□□□ -1.55
COL11A1P12107 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.39□□□□□ -1.55
COL11A1P12107 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.39□□□□□ -1.55
COL11A1P12107 AC093166.2-201ENST00000455969 1017 ntBASIC5.39□□□□□ -1.55
COL11A1P12107 PPIAP21-201ENST00000464473 501 ntBASIC5.39□□□□□ -1.55
COL11A1P12107 AC007537.2-201ENST00000472093 511 ntBASIC5.39□□□□□ -1.55
COL11A1P12107 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL11A1P12107 AL049830.4-201ENST00000555149 351 ntBASIC5.39□□□□□ -1.55
COL11A1P12107 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.39□□□□□ -1.55
COL11A1P12107 RPL26P30-202ENST00000602923 645 ntBASIC5.39□□□□□ -1.55
COL11A1P12107 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.39□□□□□ -1.55
COL11A1P12107 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL11A1P12107 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL11A1P12107 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.39□□□□□ -1.55
COL11A1P12107 CCAT2-201ENST00000630920 1752 ntBASIC5.39□□□□□ -1.55
COL11A1P12107 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL11A1P12107 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL11A1P12107 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.39□□□□□ -1.55
COL11A1P12107 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL11A1P12107 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL11A1P12107 RNU1-13P-201ENST00000384499 162 ntBASIC5.39□□□□□ -1.55
COL11A1P12107 E2F6P2-201ENST00000420708 748 ntBASIC5.39□□□□□ -1.55
COL11A1P12107 RPL21P126-201ENST00000470049 478 ntBASIC5.39□□□□□ -1.55
COL11A1P12107 RPL5P12-201ENST00000477071 851 ntBASIC5.39□□□□□ -1.55
COL11A1P12107 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL11A1P12107 AC093824.1-201ENST00000508796 343 ntBASIC5.39□□□□□ -1.55
COL11A1P12107 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
COL11A1P12107 AC069366.1-201ENST00000583159 838 ntBASIC5.39□□□□□ -1.55
COL11A1P12107 AC016717.3-201ENST00000624730 554 ntBASIC5.39□□□□□ -1.55
COL11A1P12107 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL11A1P12107 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.38□□□□□ -1.55
COL11A1P12107 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL11A1P12107 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL11A1P12107 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.38□□□□□ -1.55
COL11A1P12107 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL11A1P12107 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL11A1P12107 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL11A1P12107 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL11A1P12107 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL11A1P12107 AC023141.6-201ENST00000429418 337 ntBASIC5.38□□□□□ -1.55
COL11A1P12107 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.38□□□□□ -1.55
COL11A1P12107 AL136455.1-201ENST00000441083 1240 ntBASIC5.38□□□□□ -1.55
COL11A1P12107 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.38□□□□□ -1.55
COL11A1P12107 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.38□□□□□ -1.55
COL11A1P12107 TRAV8-5-201ENST00000537369 341 ntBASIC5.38□□□□□ -1.55
COL11A1P12107 AC027216.1-201ENST00000577726 685 ntBASIC5.38□□□□□ -1.55
COL11A1P12107 MIR4715-201ENST00000584117 79 ntBASIC5.38□□□□□ -1.55
COL11A1P12107 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.38□□□□□ -1.55
COL11A1P12107 AP003497.2-201ENST00000624220 967 ntBASIC5.38□□□□□ -1.55
COL11A1P12107 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.38□□□□□ -1.55
COL11A1P12107 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.38□□□□□ -1.55
COL11A1P12107 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.38□□□□□ -1.55
COL11A1P12107 OR14L1P-202ENST00000641545 3009 ntBASIC5.38□□□□□ -1.55
COL11A1P12107 AC025574.1-201ENST00000554784 1653 ntBASIC5.38□□□□□ -1.55
COL11A1P12107 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
COL11A1P12107 AL450345.1-202ENST00000605741 3881 ntBASIC5.37□□□□□ -1.55
COL11A1P12107 AC020656.2-201ENST00000613291 5309 ntBASIC5.37□□□□□ -1.55
COL11A1P12107 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.37□□□□□ -1.55
COL11A1P12107 RPL12P28-201ENST00000430852 489 ntBASIC5.37□□□□□ -1.55
COL11A1P12107 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.37□□□□□ -1.55
COL11A1P12107 FHP1-201ENST00000442741 703 ntBASIC5.37□□□□□ -1.55
COL11A1P12107 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL11A1P12107 EIF2S2P2-201ENST00000447161 982 ntBASIC5.37□□□□□ -1.55
COL11A1P12107 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.37□□□□□ -1.55
COL11A1P12107 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.37□□□□□ -1.55
COL11A1P12107 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.37□□□□□ -1.55
COL11A1P12107 AP005119.2-201ENST00000579735 1105 ntBASIC5.37□□□□□ -1.55
COL11A1P12107 AC069061.3-201ENST00000582254 823 ntBASIC5.37□□□□□ -1.55
COL11A1P12107 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.37□□□□□ -1.55
COL11A1P12107 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.37□□□□□ -1.55
COL11A1P12107 RNA5SP439-201ENST00000617595 124 ntBASIC5.37□□□□□ -1.55
COL11A1P12107 AL121890.3-201ENST00000618494 516 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms