Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RETP07949 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RETP07949 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RETP07949 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
RETP07949 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RETP07949 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RETP07949 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.2□□□□□ -1.58
RETP07949 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RETP07949 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
RETP07949 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RETP07949 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RETP07949 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
RETP07949 OR9G4-201ENST00000302957 984 ntBASIC5.2□□□□□ -1.58
RETP07949 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.2□□□□□ -1.58
RETP07949 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.2□□□□□ -1.58
RETP07949 AC012519.1-201ENST00000424588 610 ntBASIC5.2□□□□□ -1.58
RETP07949 RPS4XP16-201ENST00000427198 791 ntBASIC5.2□□□□□ -1.58
RETP07949 ARAFP2-201ENST00000440565 559 ntBASIC5.2□□□□□ -1.58
RETP07949 TCEA1P3-201ENST00000443005 880 ntBASIC5.2□□□□□ -1.58
RETP07949 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.2□□□□□ -1.58
RETP07949 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.2□□□□□ -1.58
RETP07949 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
RETP07949 AC063943.1-201ENST00000465434 453 ntBASIC5.2□□□□□ -1.58
RETP07949 AC020779.1-201ENST00000478757 796 ntBASIC5.2□□□□□ -1.58
RETP07949 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.2□□□□□ -1.58
RETP07949 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.2□□□□□ -1.58
RETP07949 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.2□□□□□ -1.58
RETP07949 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.2□□□□□ -1.58
RETP07949 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.2□□□□□ -1.58
RETP07949 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.2□□□□□ -1.58
RETP07949 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.2□□□□□ -1.58
RETP07949 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.2□□□□□ -1.58
RETP07949 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.2□□□□□ -1.58
RETP07949 MTCYBP13-201ENST00000578634 1093 ntBASIC5.2□□□□□ -1.58
RETP07949 MIR1254-2-201ENST00000579553 63 ntBASIC5.2□□□□□ -1.58
RETP07949 AC091932.2-201ENST00000623014 291 ntBASIC5.2□□□□□ -1.58
RETP07949 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.2□□□□□ -1.58
RETP07949 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RETP07949 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RETP07949 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.2□□□□□ -1.58
RETP07949 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RETP07949 THAP12P8-201ENST00000447914 2115 ntBASIC5.2□□□□□ -1.58
RETP07949 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RETP07949 AC093775.1-201ENST00000624154 1868 ntBASIC5.2□□□□□ -1.58
RETP07949 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RETP07949 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RETP07949 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
RETP07949 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RETP07949 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.19□□□□□ -1.58
RETP07949 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RETP07949 U3.3-201ENST00000362986 216 ntBASIC5.19□□□□□ -1.58
RETP07949 RN7SKP227-201ENST00000364445 330 ntBASIC5.19□□□□□ -1.58
RETP07949 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RETP07949 RPS3AP23-201ENST00000401762 784 ntBASIC5.19□□□□□ -1.58
RETP07949 Z97832.1-201ENST00000402490 328 ntBASIC5.19□□□□□ -1.58
RETP07949 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
RETP07949 MIR1182-201ENST00000408363 97 ntBASIC5.19□□□□□ -1.58
RETP07949 COX5BP7-201ENST00000414780 274 ntBASIC5.19□□□□□ -1.58
RETP07949 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.19□□□□□ -1.58
RETP07949 AC017019.1-201ENST00000426129 261 ntBASIC5.19□□□□□ -1.58
RETP07949 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.19□□□□□ -1.58
RETP07949 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RETP07949 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.19□□□□□ -1.58
RETP07949 AC112498.1-201ENST00000444401 332 ntBASIC5.19□□□□□ -1.58
RETP07949 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.19□□□□□ -1.58
RETP07949 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.19□□□□□ -1.58
RETP07949 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.19□□□□□ -1.58
RETP07949 AC017007.3-201ENST00000479865 435 ntBASIC5.19□□□□□ -1.58
RETP07949 OR9N1P-201ENST00000491296 333 ntBASIC5.19□□□□□ -1.58
RETP07949 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.19□□□□□ -1.58
RETP07949 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.19□□□□□ -1.58
RETP07949 AC093720.1-201ENST00000505681 714 ntBASIC5.19□□□□□ -1.58
RETP07949 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.19□□□□□ -1.58
RETP07949 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.19□□□□□ -1.58
RETP07949 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.19□□□□□ -1.58
RETP07949 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.19□□□□□ -1.58
RETP07949 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.19□□□□□ -1.58
RETP07949 BNIP3P5-201ENST00000562290 498 ntBASIC5.19□□□□□ -1.58
RETP07949 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.19□□□□□ -1.58
RETP07949 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RETP07949 MIR3667-201ENST00000581025 74 ntBASIC5.19□□□□□ -1.58
RETP07949 RN7SL356P-201ENST00000582228 248 ntBASIC5.19□□□□□ -1.58
RETP07949 AC108738.1-201ENST00000603703 237 ntBASIC5.19□□□□□ -1.58
RETP07949 AL162431.4-201ENST00000604674 411 ntBASIC5.19□□□□□ -1.58
RETP07949 AL627230.1-201ENST00000613077 211 ntBASIC5.19□□□□□ -1.58
RETP07949 AL591926.8-201ENST00000616876 211 ntBASIC5.19□□□□□ -1.58
RETP07949 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.19□□□□□ -1.58
RETP07949 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RETP07949 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.19□□□□□ -1.58
RETP07949 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.19□□□□□ -1.58
RETP07949 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.19□□□□□ -1.58
RETP07949 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RETP07949 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RETP07949 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RETP07949 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
RETP07949 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RETP07949 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.18□□□□□ -1.58
RETP07949 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RETP07949 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.18□□□□□ -1.58
RETP07949 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms