Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 RNU6-877P-201ENST00000383868 107 ntBASIC6.68□□□□□ -1.34
PDGFAP04085 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
PDGFAP04085 AL136100.1-201ENST00000407696 330 ntBASIC6.68□□□□□ -1.34
PDGFAP04085 MIR1266-201ENST00000408125 84 ntBASIC6.68□□□□□ -1.34
PDGFAP04085 SNORA3.1-201ENST00000408166 111 ntBASIC6.68□□□□□ -1.34
PDGFAP04085 RN7SKP146-201ENST00000410242 334 ntBASIC6.68□□□□□ -1.34
PDGFAP04085 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.68□□□□□ -1.34
PDGFAP04085 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC6.68□□□□□ -1.34
PDGFAP04085 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC6.68□□□□□ -1.34
PDGFAP04085 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC6.68□□□□□ -1.34
PDGFAP04085 SNRPEP7-201ENST00000438350 220 ntBASIC6.68□□□□□ -1.34
PDGFAP04085 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.68□□□□□ -1.34
PDGFAP04085 TRGVB-201ENST00000453257 471 ntBASIC6.68□□□□□ -1.34
PDGFAP04085 MTCO3P20-201ENST00000454926 688 ntBASIC6.68□□□□□ -1.34
PDGFAP04085 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.68□□□□□ -1.34
PDGFAP04085 RPL21P71-201ENST00000465598 459 ntBASIC6.68□□□□□ -1.34
PDGFAP04085 AC012170.1-201ENST00000495139 359 ntBASIC6.68□□□□□ -1.34
PDGFAP04085 AC009567.2-201ENST00000502989 349 ntBASIC6.68□□□□□ -1.34
PDGFAP04085 MTND6P8-201ENST00000503471 522 ntBASIC6.68□□□□□ -1.34
PDGFAP04085 MTCO2P30-201ENST00000503662 364 ntBASIC6.68□□□□□ -1.34
PDGFAP04085 AC097173.1-201ENST00000505862 819 ntBASIC6.68□□□□□ -1.34
PDGFAP04085 RN7SKP2-201ENST00000517003 319 ntBASIC6.68□□□□□ -1.34
PDGFAP04085 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC6.68□□□□□ -1.34
PDGFAP04085 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.68□□□□□ -1.34
PDGFAP04085 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC6.68□□□□□ -1.34
PDGFAP04085 AC027667.1-201ENST00000545814 304 ntBASIC6.68□□□□□ -1.34
PDGFAP04085 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.68□□□□□ -1.34
PDGFAP04085 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC6.68□□□□□ -1.34
PDGFAP04085 RPL21P5-201ENST00000554662 472 ntBASIC6.68□□□□□ -1.34
PDGFAP04085 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.68□□□□□ -1.34
PDGFAP04085 HNRNPA1P71-201ENST00000559135 950 ntBASIC6.68□□□□□ -1.34
PDGFAP04085 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.68□□□□□ -1.34
PDGFAP04085 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC6.68□□□□□ -1.34
PDGFAP04085 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.68□□□□□ -1.34
PDGFAP04085 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC6.68□□□□□ -1.34
PDGFAP04085 AC005034.5-201ENST00000604219 466 ntBASIC6.68□□□□□ -1.34
PDGFAP04085 AC019257.2-201ENST00000605539 497 ntBASIC6.68□□□□□ -1.34
PDGFAP04085 AC022743.1-201ENST00000624990 664 ntBASIC6.68□□□□□ -1.34
PDGFAP04085 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.68□□□□□ -1.34
PDGFAP04085 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.68□□□□□ -1.34
PDGFAP04085 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.68□□□□□ -1.34
PDGFAP04085 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.68□□□□□ -1.34
PDGFAP04085 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
PDGFAP04085 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
PDGFAP04085 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.68□□□□□ -1.34
PDGFAP04085 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.68□□□□□ -1.34
PDGFAP04085 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFAP04085 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFAP04085 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFAP04085 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
PDGFAP04085 AC078880.4-201ENST00000617627 1749 ntBASIC6.67□□□□□ -1.34
PDGFAP04085 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC6.67□□□□□ -1.34
PDGFAP04085 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFAP04085 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFAP04085 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFAP04085 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFAP04085 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
PDGFAP04085 AL121949.2-201ENST00000403446 1548 ntBASIC6.67□□□□□ -1.34
PDGFAP04085 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
PDGFAP04085 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFAP04085 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFAP04085 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
PDGFAP04085 AC130360.2-201ENST00000533477 1556 ntBASIC6.67□□□□□ -1.34
PDGFAP04085 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
PDGFAP04085 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFAP04085 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFAP04085 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFAP04085 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
PDGFAP04085 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.67□□□□□ -1.34
PDGFAP04085 Y_RNA.608-201ENST00000410647 95 ntBASIC6.67□□□□□ -1.34
PDGFAP04085 RNU2-6P-201ENST00000411404 190 ntBASIC6.67□□□□□ -1.34
PDGFAP04085 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC6.67□□□□□ -1.34
PDGFAP04085 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFAP04085 NUP35P2-201ENST00000416748 943 ntBASIC6.67□□□□□ -1.34
PDGFAP04085 BX295541.1-201ENST00000417774 250 ntBASIC6.67□□□□□ -1.34
PDGFAP04085 NPM1P34-201ENST00000428821 893 ntBASIC6.67□□□□□ -1.34
PDGFAP04085 NANOGP6-201ENST00000429190 847 ntBASIC6.67□□□□□ -1.34
PDGFAP04085 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC6.67□□□□□ -1.34
PDGFAP04085 AC022022.1-201ENST00000430304 178 ntBASIC6.67□□□□□ -1.34
PDGFAP04085 PUDPP2-201ENST00000431423 643 ntBASIC6.67□□□□□ -1.34
PDGFAP04085 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.67□□□□□ -1.34
PDGFAP04085 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC6.67□□□□□ -1.34
PDGFAP04085 RPEP4-201ENST00000437636 602 ntBASIC6.67□□□□□ -1.34
PDGFAP04085 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms