Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 RN7SKP34-201ENST00000516142 244 ntBASIC3.76□□□□□ -1.81
HLA-DQA1P01909 RNA5SP392-201ENST00000516905 112 ntBASIC3.76□□□□□ -1.81
HLA-DQA1P01909 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 AP000648.1-201ENST00000529682 397 ntBASIC3.76□□□□□ -1.81
HLA-DQA1P01909 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 RBM22P12-201ENST00000567098 1255 ntBASIC3.76□□□□□ -1.81
HLA-DQA1P01909 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 PPATP2-201ENST00000605635 508 ntBASIC3.76□□□□□ -1.81
HLA-DQA1P01909 AL031601.1-201ENST00000605702 394 ntBASIC3.76□□□□□ -1.81
HLA-DQA1P01909 SNX18P1Y-201ENST00000616231 511 ntBASIC3.76□□□□□ -1.81
HLA-DQA1P01909 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 TLK1P1-201ENST00000456760 2440 ntBASIC3.76□□□□□ -1.81
HLA-DQA1P01909 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 USP8-204ENST00000425032 3559 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 KPNA2P2-201ENST00000419546 1489 ntBASIC3.75□□□□□ -1.81
HLA-DQA1P01909 SRRM1P3-201ENST00000426911 2678 ntBASIC3.75□□□□□ -1.81
HLA-DQA1P01909 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 RNA5SP131-201ENST00000365452 119 ntBASIC3.75□□□□□ -1.81
HLA-DQA1P01909 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 RNA5SP284-201ENST00000384547 118 ntBASIC3.75□□□□□ -1.81
HLA-DQA1P01909 SNORA66-201ENST00000384792 133 ntBASIC3.75□□□□□ -1.81
HLA-DQA1P01909 MIR137-201ENST00000385223 102 ntBASIC3.75□□□□□ -1.81
HLA-DQA1P01909 RPL34P3-201ENST00000421454 338 ntBASIC3.75□□□□□ -1.81
HLA-DQA1P01909 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 AC092162.1-201ENST00000432828 434 ntBASIC3.75□□□□□ -1.81
HLA-DQA1P01909 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 RBMY2TP-201ENST00000451162 947 ntBASIC3.75□□□□□ -1.81
HLA-DQA1P01909 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 RN7SL517P-201ENST00000462240 305 ntBASIC3.75□□□□□ -1.81
HLA-DQA1P01909 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 RPL7P40-201ENST00000481703 745 ntBASIC3.75□□□□□ -1.81
HLA-DQA1P01909 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 AC027544.3-201ENST00000535082 757 ntBASIC3.75□□□□□ -1.81
HLA-DQA1P01909 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 AL049872.1-201ENST00000556323 322 ntBASIC3.75□□□□□ -1.81
HLA-DQA1P01909 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 NPM1P45-201ENST00000583151 559 ntBASIC3.75□□□□□ -1.81
HLA-DQA1P01909 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 MRO-208ENST00000588444 866 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 FAM60CP-201ENST00000591086 664 ntBASIC3.75□□□□□ -1.81
HLA-DQA1P01909 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.75□□□□□ -1.81
HLA-DQA1P01909 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 MIR193BHG-214ENST00000641765 509 ntBASIC3.75□□□□□ -1.81
HLA-DQA1P01909 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 AC114786.1-201ENST00000512892 1415 ntBASIC3.75□□□□□ -1.81
HLA-DQA1P01909 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HLA-DQA1P01909 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms