Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CUX2O14529 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CUX2O14529 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CUX2O14529 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
CUX2O14529 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC8.41□□□□□ -1.06
CUX2O14529 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CUX2O14529 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC8.41□□□□□ -1.06
CUX2O14529 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
CUX2O14529 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
CUX2O14529 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
CUX2O14529 Y_RNA.111-201ENST00000363248 100 ntBASIC8.41□□□□□ -1.06
CUX2O14529 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
CUX2O14529 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
CUX2O14529 ATP5HP3-201ENST00000396994 486 ntBASIC8.41□□□□□ -1.06
CUX2O14529 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
CUX2O14529 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC8.41□□□□□ -1.06
CUX2O14529 YME1L1P1-201ENST00000429435 297 ntBASIC8.41□□□□□ -1.06
CUX2O14529 AC008481.1-201ENST00000463278 396 ntBASIC8.41□□□□□ -1.06
CUX2O14529 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC8.41□□□□□ -1.06
CUX2O14529 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC8.41□□□□□ -1.06
CUX2O14529 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC8.41□□□□□ -1.06
CUX2O14529 MIR3200-201ENST00000580767 85 ntBASIC8.41□□□□□ -1.06
CUX2O14529 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC8.41□□□□□ -1.06
CUX2O14529 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC8.41□□□□□ -1.06
CUX2O14529 AC007179.3-201ENST00000604976 235 ntBASIC8.41□□□□□ -1.06
CUX2O14529 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CUX2O14529 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CUX2O14529 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CUX2O14529 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CUX2O14529 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC8.4□□□□□ -1.06
CUX2O14529 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CUX2O14529 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC8.4□□□□□ -1.06
CUX2O14529 RN7SKP185-201ENST00000362813 326 ntBASIC8.4□□□□□ -1.06
CUX2O14529 AC097374.1-203ENST00000400783 485 ntBASIC8.4□□□□□ -1.06
CUX2O14529 NDUFB4P4-201ENST00000404822 243 ntBASIC8.4□□□□□ -1.06
CUX2O14529 AC114814.2-201ENST00000419195 485 ntBASIC8.4□□□□□ -1.06
CUX2O14529 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC8.4□□□□□ -1.06
CUX2O14529 RN7SL189P-201ENST00000468631 289 ntBASIC8.4□□□□□ -1.06
CUX2O14529 RPS24P16-201ENST00000497294 392 ntBASIC8.4□□□□□ -1.06
CUX2O14529 AP003730.1-201ENST00000524605 285 ntBASIC8.4□□□□□ -1.06
CUX2O14529 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC8.4□□□□□ -1.06
CUX2O14529 RPL7P50-201ENST00000600588 727 ntBASIC8.4□□□□□ -1.06
CUX2O14529 AC012468.1-201ENST00000604888 430 ntBASIC8.4□□□□□ -1.06
CUX2O14529 AC005899.7-201ENST00000618199 588 ntBASIC8.4□□□□□ -1.06
CUX2O14529 AC015908.5-201ENST00000623289 343 ntBASIC8.4□□□□□ -1.06
CUX2O14529 DMD-202ENST00000343523 5623 ntTSL 5 BASIC8.4□□□□□ -1.06
CUX2O14529 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
CUX2O14529 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC8.4□□□□□ -1.06
CUX2O14529 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CUX2O14529 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CUX2O14529 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CUX2O14529 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC8.4□□□□□ -1.06
CUX2O14529 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC8.4□□□□□ -1.07
CUX2O14529 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
CUX2O14529 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
CUX2O14529 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.07
CUX2O14529 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CUX2O14529 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
CUX2O14529 TMBIM7P-201ENST00000418074 855 ntBASIC8.39□□□□□ -1.07
CUX2O14529 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC8.39□□□□□ -1.07
CUX2O14529 AC091959.2-201ENST00000477363 321 ntBASIC8.39□□□□□ -1.07
CUX2O14529 NIFKP7-201ENST00000503365 834 ntBASIC8.39□□□□□ -1.07
CUX2O14529 AC136777.2-201ENST00000522979 358 ntBASIC8.39□□□□□ -1.07
CUX2O14529 AC079064.1-201ENST00000528365 362 ntBASIC8.39□□□□□ -1.07
CUX2O14529 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC8.39□□□□□ -1.07
CUX2O14529 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC8.39□□□□□ -1.07
CUX2O14529 AC024023.1-201ENST00000624530 922 ntBASIC8.39□□□□□ -1.07
CUX2O14529 AL049536.1-201ENST00000625043 744 ntBASIC8.39□□□□□ -1.07
CUX2O14529 ADAM24P-201ENST00000398655 2101 ntBASIC8.39□□□□□ -1.07
CUX2O14529 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC8.39□□□□□ -1.07
CUX2O14529 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CUX2O14529 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CUX2O14529 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
CUX2O14529 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
CUX2O14529 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CUX2O14529 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC8.38□□□□□ -1.07
CUX2O14529 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC8.38□□□□□ -1.07
CUX2O14529 AC079168.2-201ENST00000453977 416 ntBASIC8.38□□□□□ -1.07
CUX2O14529 CDV3-208ENST00000511392 554 ntTSL 5 BASIC8.38□□□□□ -1.07
CUX2O14529 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC8.38□□□□□ -1.07
CUX2O14529 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC8.38□□□□□ -1.07
CUX2O14529 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC8.38□□□□□ -1.07
CUX2O14529 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CUX2O14529 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC8.38□□□□□ -1.07
CUX2O14529 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC8.38□□□□□ -1.07
CUX2O14529 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
CUX2O14529 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CUX2O14529 AC138907.8-201ENST00000623981 2256 ntBASIC8.38□□□□□ -1.07
CUX2O14529 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC8.38□□□□□ -1.07
CUX2O14529 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CUX2O14529 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CUX2O14529 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CUX2O14529 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC8.38□□□□□ -1.07
CUX2O14529 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
CUX2O14529 RNU6-628P-201ENST00000410675 107 ntBASIC8.38□□□□□ -1.07
CUX2O14529 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC8.38□□□□□ -1.07
CUX2O14529 AL158827.1-201ENST00000416300 391 ntBASIC8.38□□□□□ -1.07
CUX2O14529 PDSS1P1-201ENST00000422953 1114 ntBASIC8.38□□□□□ -1.07
CUX2O14529 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
CUX2O14529 MTND4LP31-201ENST00000514859 294 ntBASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms