Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SOX1O00570 LRRC77P-213ENST00000637727 880 ntBASIC6.89□□□□□ -1.31
SOX1O00570 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.89□□□□□ -1.31
SOX1O00570 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SOX1O00570 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
SOX1O00570 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.89□□□□□ -1.31
SOX1O00570 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.89□□□□□ -1.31
SOX1O00570 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SOX1O00570 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.89□□□□□ -1.31
SOX1O00570 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SOX1O00570 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
SOX1O00570 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SOX1O00570 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SOX1O00570 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.89□□□□□ -1.31
SOX1O00570 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SOX1O00570 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SOX1O00570 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
SOX1O00570 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SOX1O00570 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC6.89□□□□□ -1.31
SOX1O00570 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SOX1O00570 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.88□□□□□ -1.31
SOX1O00570 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SOX1O00570 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SOX1O00570 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.88□□□□□ -1.31
SOX1O00570 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SOX1O00570 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.88□□□□□ -1.31
SOX1O00570 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SOX1O00570 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
SOX1O00570 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.88□□□□□ -1.31
SOX1O00570 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SOX1O00570 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.88□□□□□ -1.31
SOX1O00570 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
SOX1O00570 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SOX1O00570 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SOX1O00570 RNA5SP346-201ENST00000363541 121 ntBASIC6.88□□□□□ -1.31
SOX1O00570 RNU6-621P-201ENST00000364752 109 ntBASIC6.88□□□□□ -1.31
SOX1O00570 RNU6-116P-201ENST00000384042 109 ntBASIC6.88□□□□□ -1.31
SOX1O00570 RN7SKP56-201ENST00000410513 331 ntBASIC6.88□□□□□ -1.31
SOX1O00570 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SOX1O00570 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.88□□□□□ -1.31
SOX1O00570 AL807761.1-201ENST00000417622 171 ntBASIC6.88□□□□□ -1.31
SOX1O00570 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.88□□□□□ -1.31
SOX1O00570 AC006065.1-201ENST00000422539 802 ntBASIC6.88□□□□□ -1.31
SOX1O00570 MTCO1P54-201ENST00000430139 712 ntBASIC6.88□□□□□ -1.31
SOX1O00570 TRIM60P3Y-201ENST00000432201 673 ntBASIC6.88□□□□□ -1.31
SOX1O00570 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.88□□□□□ -1.31
SOX1O00570 ANKRD54P1-201ENST00000433115 471 ntBASIC6.88□□□□□ -1.31
SOX1O00570 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC6.88□□□□□ -1.31
SOX1O00570 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.88□□□□□ -1.31
SOX1O00570 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC6.88□□□□□ -1.31
SOX1O00570 VN1R10P-201ENST00000447106 875 ntBASIC6.88□□□□□ -1.31
SOX1O00570 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC6.88□□□□□ -1.31
SOX1O00570 AC098824.1-201ENST00000453565 980 ntBASIC6.88□□□□□ -1.31
SOX1O00570 AC091153.1-201ENST00000466297 402 ntBASIC6.88□□□□□ -1.31
SOX1O00570 AC135999.1-201ENST00000478962 479 ntBASIC6.88□□□□□ -1.31
SOX1O00570 RPL9P6-201ENST00000492764 598 ntBASIC6.88□□□□□ -1.31
SOX1O00570 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SOX1O00570 RN7SL808P-201ENST00000496066 299 ntBASIC6.88□□□□□ -1.31
SOX1O00570 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC6.88□□□□□ -1.31
SOX1O00570 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.88□□□□□ -1.31
SOX1O00570 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC6.88□□□□□ -1.31
SOX1O00570 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC6.88□□□□□ -1.31
SOX1O00570 AC104108.1-201ENST00000509930 412 ntBASIC6.88□□□□□ -1.31
SOX1O00570 KHDC1P1-201ENST00000511053 508 ntBASIC6.88□□□□□ -1.31
SOX1O00570 RNU6-507P-201ENST00000516045 100 ntBASIC6.88□□□□□ -1.31
SOX1O00570 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC6.88□□□□□ -1.31
SOX1O00570 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.88□□□□□ -1.31
SOX1O00570 GSTP1P1-201ENST00000548078 319 ntBASIC6.88□□□□□ -1.31
SOX1O00570 AC124947.2-202ENST00000552735 133 ntBASIC6.88□□□□□ -1.31
SOX1O00570 CENPUP2-201ENST00000555897 1186 ntBASIC6.88□□□□□ -1.31
SOX1O00570 AP005119.1-201ENST00000580956 292 ntBASIC6.88□□□□□ -1.31
SOX1O00570 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC6.88□□□□□ -1.31
SOX1O00570 AC005730.3-201ENST00000583067 366 ntBASIC6.88□□□□□ -1.31
SOX1O00570 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.88□□□□□ -1.31
SOX1O00570 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC6.88□□□□□ -1.31
SOX1O00570 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.88□□□□□ -1.31
SOX1O00570 FO393422.1-201ENST00000603908 708 ntBASIC6.88□□□□□ -1.31
SOX1O00570 AC005962.2-201ENST00000611427 652 ntBASIC6.88□□□□□ -1.31
SOX1O00570 AP005264.7-201ENST00000625003 745 ntBASIC6.88□□□□□ -1.31
SOX1O00570 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SOX1O00570 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.88□□□□□ -1.31
SOX1O00570 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SOX1O00570 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
SOX1O00570 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SOX1O00570 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC6.88□□□□□ -1.31
SOX1O00570 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
SOX1O00570 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SOX1O00570 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC6.88□□□□□ -1.31
SOX1O00570 AC079753.1-201ENST00000623243 3868 ntBASIC6.88□□□□□ -1.31
SOX1O00570 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
SOX1O00570 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
SOX1O00570 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
SOX1O00570 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SOX1O00570 AC020978.8-201ENST00000571975 3022 ntBASIC6.87□□□□□ -1.31
SOX1O00570 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SOX1O00570 CDY11P-201ENST00000447168 1651 ntBASIC6.87□□□□□ -1.31
SOX1O00570 MAPK10-377ENST00000642006 2752 ntBASIC6.87□□□□□ -1.31
SOX1O00570 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SOX1O00570 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SOX1O00570 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms