Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 NR1H5P-201ENST00000452683 1377 ntBASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 AC139713.2-215ENST00000641428 5037 ntBASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 AL353625.1-202ENST00000366273 571 ntBASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 MRRF-207ENST00000373729 870 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 AP000580.1-201ENST00000404439 358 ntBASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 AL139148.1-201ENST00000427122 680 ntBASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 FABP7P2-201ENST00000429946 379 ntBASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 CNOT7P2-201ENST00000441051 832 ntBASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 RPS6P2-201ENST00000454208 705 ntBASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 AC079841.1-201ENST00000481228 950 ntBASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 AC072052.1-201ENST00000496556 306 ntBASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 AC027308.1-201ENST00000517993 110 ntBASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 AC022832.1-201ENST00000530718 645 ntBASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 MYLK-221ENST00000583087 678 ntTSL 4 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 AL008729.2-201ENST00000606393 473 ntBASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 OR14L1P-202ENST00000641545 3009 ntBASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DRB4X5D2U9 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 AL606537.1-201ENST00000607258 2011 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 SNORA51.1-201ENST00000363243 140 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 RN7SKP269-201ENST00000365545 319 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 DNAJA1P4-201ENST00000406473 1166 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 U3.36-201ENST00000408418 213 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 RN7SKP114-201ENST00000410327 279 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 KNOP1P3-201ENST00000446933 426 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 AL354714.3-201ENST00000447284 493 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 GYG1P1-201ENST00000460864 698 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 AC097484.1-201ENST00000471148 389 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 SNRPCP2-201ENST00000504370 475 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 RNA5SP360-201ENST00000516555 118 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 IGHVII-44-2-201ENST00000517728 250 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 HNRNPRP2-201ENST00000528421 743 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 AL512310.9-201ENST00000553311 948 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 MIR4489-201ENST00000578869 62 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 AC011447.4-201ENST00000587562 111 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 RPL26P30-202ENST00000602923 645 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 MIR6862-1-201ENST00000613016 70 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 MIR6862-2-201ENST00000614755 70 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 AC009237.17-201ENST00000618111 748 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 CGA-206ENST00000630630 832 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms