Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PHF8Q9UPP1 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
PHF8Q9UPP1 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
PHF8Q9UPP1 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC9.5□□□□□ -0.89
PHF8Q9UPP1 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
PHF8Q9UPP1 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
PHF8Q9UPP1 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
PHF8Q9UPP1 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PHF8Q9UPP1 IST1-208ENST00000535424 4082 ntTSL 5 BASIC9.5□□□□□ -0.89
PHF8Q9UPP1 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC9.5□□□□□ -0.89
PHF8Q9UPP1 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC9.5□□□□□ -0.89
PHF8Q9UPP1 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AL512662.1-201ENST00000624850 2251 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AC129502.1-201ENST00000623261 1654 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 OR5J1P-201ENST00000313544 939 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 U8.3-201ENST00000363321 132 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 RNU6-1339P-201ENST00000363574 91 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 Y_RNA.259-201ENST00000364619 101 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 RPL23AP47-201ENST00000408017 460 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 RNU2-47P-201ENST00000410649 186 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AC007559.1-201ENST00000428736 355 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 NANOGP6-201ENST00000429190 847 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 BMS1P19-201ENST00000433925 393 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 COL11A2P1-205ENST00000441798 676 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 POU5F1P5-201ENST00000445059 658 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AC112484.3-201ENST00000505910 329 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AC022296.2-201ENST00000512424 202 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AC027801.3-201ENST00000515049 698 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 IGHV7-34-1-201ENST00000519200 350 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AP001189.2-201ENST00000527320 189 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AC084121.1-201ENST00000533882 835 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 MIR6721-201ENST00000617181 87 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AC010325.3-201ENST00000641084 394 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 DDX18P6-201ENST00000450119 1997 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AC124045.1-201ENST00000606008 1953 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AC090771.1-201ENST00000585803 1618 ntBASIC9.49□□□□□ -0.89
PHF8Q9UPP1 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC9.48□□□□□ -0.89
PHF8Q9UPP1 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC9.48□□□□□ -0.89
PHF8Q9UPP1 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
PHF8Q9UPP1 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
PHF8Q9UPP1 LINC01613-201ENST00000561476 2780 ntBASIC9.48□□□□□ -0.89
PHF8Q9UPP1 STXBP5L-205ENST00000472879 3067 ntTSL 5 BASIC9.48□□□□□ -0.89
PHF8Q9UPP1 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC9.48□□□□□ -0.89
PHF8Q9UPP1 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PHF8Q9UPP1 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PHF8Q9UPP1 RNU1-55P-201ENST00000365510 158 ntBASIC9.48□□□□□ -0.89
PHF8Q9UPP1 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC9.48□□□□□ -0.89
PHF8Q9UPP1 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
PHF8Q9UPP1 NAP1L1P2-201ENST00000414182 1089 ntBASIC9.48□□□□□ -0.89
PHF8Q9UPP1 AC083875.1-201ENST00000419509 405 ntBASIC9.48□□□□□ -0.89
PHF8Q9UPP1 AC062016.2-201ENST00000420950 676 ntBASIC9.48□□□□□ -0.89
PHF8Q9UPP1 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC9.48□□□□□ -0.89
PHF8Q9UPP1 AC133104.1-201ENST00000429100 218 ntBASIC9.48□□□□□ -0.89
PHF8Q9UPP1 CBX3P6-201ENST00000430257 527 ntBASIC9.48□□□□□ -0.89
PHF8Q9UPP1 AC092106.2-201ENST00000436597 487 ntBASIC9.48□□□□□ -0.89
PHF8Q9UPP1 MTND1P9-201ENST00000453775 944 ntBASIC9.48□□□□□ -0.89
PHF8Q9UPP1 MTND1P12-201ENST00000455231 147 ntBASIC9.48□□□□□ -0.89
PHF8Q9UPP1 RN7SL413P-201ENST00000482700 297 ntBASIC9.48□□□□□ -0.89
PHF8Q9UPP1 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC9.48□□□□□ -0.89
PHF8Q9UPP1 RNU6-416P-201ENST00000516265 103 ntBASIC9.48□□□□□ -0.89
PHF8Q9UPP1 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC9.48□□□□□ -0.89
PHF8Q9UPP1 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC9.48□□□□□ -0.89
PHF8Q9UPP1 AC007255.2-201ENST00000604053 631 ntBASIC9.48□□□□□ -0.89
PHF8Q9UPP1 AL590032.1-201ENST00000604920 252 ntBASIC9.48□□□□□ -0.89
PHF8Q9UPP1 AC015982.1-201ENST00000608113 465 ntBASIC9.48□□□□□ -0.89
PHF8Q9UPP1 AC103710.4-201ENST00000609301 899 ntBASIC9.48□□□□□ -0.89
PHF8Q9UPP1 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC9.48□□□□□ -0.89
PHF8Q9UPP1 DISC2.1-201ENST00000612827 205 ntBASIC9.48□□□□□ -0.89
PHF8Q9UPP1 RN7SL261P-201ENST00000613441 282 ntBASIC9.48□□□□□ -0.89
PHF8Q9UPP1 AP006248.2-201ENST00000623309 592 ntBASIC9.48□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms