Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC88CQ9P219 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 SNORA73.1-201ENST00000363107 205 ntBASIC4.68□□□□□ -1.66
CCDC88CQ9P219 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 RPL37P18-201ENST00000411602 243 ntBASIC4.68□□□□□ -1.66
CCDC88CQ9P219 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 RPL12P43-201ENST00000420608 499 ntBASIC4.68□□□□□ -1.66
CCDC88CQ9P219 REREP1Y-201ENST00000422655 198 ntBASIC4.68□□□□□ -1.66
CCDC88CQ9P219 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 RPS26P4-201ENST00000431743 355 ntBASIC4.68□□□□□ -1.66
CCDC88CQ9P219 RPL12P17-201ENST00000432393 498 ntBASIC4.68□□□□□ -1.66
CCDC88CQ9P219 REREP2Y-201ENST00000439103 200 ntBASIC4.68□□□□□ -1.66
CCDC88CQ9P219 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 AC012123.2-201ENST00000485809 248 ntBASIC4.68□□□□□ -1.66
CCDC88CQ9P219 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 OR5AN2P-201ENST00000534535 896 ntBASIC4.68□□□□□ -1.66
CCDC88CQ9P219 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 SETP3-201ENST00000581726 813 ntBASIC4.68□□□□□ -1.66
CCDC88CQ9P219 AC008814.1-201ENST00000603797 406 ntBASIC4.68□□□□□ -1.66
CCDC88CQ9P219 AC104687.2-201ENST00000604442 342 ntBASIC4.68□□□□□ -1.66
CCDC88CQ9P219 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 AL672167.1-205ENST00000641112 3080 ntBASIC4.68□□□□□ -1.66
CCDC88CQ9P219 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 SNORA66-201ENST00000384792 133 ntBASIC4.68□□□□□ -1.66
CCDC88CQ9P219 OR51B3P-201ENST00000412287 913 ntBASIC4.68□□□□□ -1.66
CCDC88CQ9P219 AC091390.1-201ENST00000433904 331 ntBASIC4.68□□□□□ -1.66
CCDC88CQ9P219 AC006466.1-201ENST00000438721 289 ntBASIC4.68□□□□□ -1.66
CCDC88CQ9P219 AC007686.1-201ENST00000488511 463 ntBASIC4.68□□□□□ -1.66
CCDC88CQ9P219 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 RNA5SP303-201ENST00000516192 130 ntBASIC4.68□□□□□ -1.66
CCDC88CQ9P219 AC012339.2-201ENST00000523996 453 ntBASIC4.68□□□□□ -1.66
CCDC88CQ9P219 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
CCDC88CQ9P219 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 GLULP6-201ENST00000399502 913 ntBASIC4.67□□□□□ -1.66
CCDC88CQ9P219 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 RN7SKP100-201ENST00000411258 284 ntBASIC4.67□□□□□ -1.66
CCDC88CQ9P219 DPPA2P2-201ENST00000418220 897 ntBASIC4.67□□□□□ -1.66
CCDC88CQ9P219 AC009238.2-201ENST00000431026 355 ntBASIC4.67□□□□□ -1.66
CCDC88CQ9P219 AC016712.1-201ENST00000431088 378 ntBASIC4.67□□□□□ -1.66
CCDC88CQ9P219 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 GSTP1P1-201ENST00000548078 319 ntBASIC4.67□□□□□ -1.66
CCDC88CQ9P219 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 AC091042.1-201ENST00000579213 173 ntBASIC4.67□□□□□ -1.66
CCDC88CQ9P219 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.67□□□□□ -1.66
CCDC88CQ9P219 AC138965.3-201ENST00000623875 498 ntBASIC4.67□□□□□ -1.66
CCDC88CQ9P219 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 SAMMSON-226ENST00000642089 1582 ntBASIC4.67□□□□□ -1.66
CCDC88CQ9P219 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 RN7SKP113-201ENST00000363891 295 ntBASIC4.67□□□□□ -1.66
CCDC88CQ9P219 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 AC013429.2-201ENST00000418798 781 ntBASIC4.67□□□□□ -1.66
CCDC88CQ9P219 OR2AM1P-201ENST00000422137 422 ntBASIC4.67□□□□□ -1.66
CCDC88CQ9P219 CKS1BP6-201ENST00000424932 240 ntBASIC4.67□□□□□ -1.66
CCDC88CQ9P219 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 RPL12P18-201ENST00000437175 325 ntBASIC4.67□□□□□ -1.66
CCDC88CQ9P219 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 AC096741.1-201ENST00000472250 846 ntBASIC4.67□□□□□ -1.66
CCDC88CQ9P219 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms