Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC004585.1-201ENST00000578280 1014 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 RPL19-205ENST00000579374 690 ntAPPRIS ALT1 TSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 MIR5688-201ENST00000580619 83 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 MIR3145-201ENST00000580727 82 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 MIR3689B-201ENST00000581772 148 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 MIR4511-201ENST00000582784 87 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC036176.2-201ENST00000589763 1153 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 CD209-208ENST00000593821 807 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 LSP1P1-201ENST00000599825 133 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 Metazoa_SRP.25-201ENST00000600454 283 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC068790.4-201ENST00000602474 263 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC007566.2-201ENST00000603642 413 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 RMST_8.1-201ENST00000610287 165 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AF254982.1-201ENST00000611755 311 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AL080312.2-201ENST00000613001 630 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC006262.4-201ENST00000613498 286 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AL117372.1-201ENST00000613711 459 ntTSL 4 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC013791.1-201ENST00000616619 62 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC244153.1-201ENST00000617990 702 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 MIR6741-201ENST00000618782 63 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AL354718.1-201ENST00000619764 589 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 Metazoa_SRP.160-201ENST00000622203 277 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AL358613.2-201ENST00000624651 567 ntTSL 4 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 TEX41-293ENST00000630451 690 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 KRTAP9-1-203ENST00000634358 330 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AL603764.2-201ENST00000636038 344 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC092329.4-203ENST00000639752 556 ntTSL 4 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 RGL4-210ENST00000615003 3014 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 R3HDM2-202ENST00000358907 3974 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AL356599.1-205ENST00000606388 3961 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 TMEM255A-204ENST00000440464 3172 ntAPPRIS ALT1 TSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 TAS2R4-201ENST00000247881 2378 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 S100A7A-203ENST00000368729 4279 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 CTCFL-202ENST00000371196 3491 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 HARS-208ENST00000504366 3494 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 TRIM52-205ENST00000611618 3466 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 SP140L-201ENST00000243810 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC079331.2-201ENST00000623462 2546 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 PGK1-201ENST00000373316 4887 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AACSP1-201ENST00000503486 2822 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 NF2-206ENST00000361676 1716 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC18A1-205ENST00000440926 2956 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 UNC45A-216ENST00000639885 3255 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 GOSR2-218ENST00000638634 3446 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 CNTN4-205ENST00000427331 4980 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 MAGED2-202ENST00000347546 2177 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 TCF4-211ENST00000561992 2184 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 PPIP5K1-202ENST00000348806 5433 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 ZMYND11-205ENST00000381607 3898 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 GGCX-205ENST00000430215 2314 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 CXCR1-201ENST00000295683 2488 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 UGT1A6-201ENST00000305139 2479 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 FKBP9P1-202ENST00000455909 2451 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 BTN2A3P-203ENST00000465856 2483 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC120036.5-201ENST00000528139 2491 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 KPRP-201ENST00000606109 2492 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AL161912.4-201ENST00000623889 2468 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 PHF19-214ENST00000616568 4159 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 FCAMR-201ENST00000324852 2605 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 REXO5-202ENST00000348433 2604 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 LINC00365-201ENST00000413591 2618 ntTSL 3 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC25A21-201ENST00000331299 2785 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 TCF4-205ENST00000537578 2767 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 MYRIP-210ENST00000539167 4635 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 TMC3-202ENST00000558726 4644 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 SEMA4A-202ENST00000368282 3249 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 WNT3-201ENST00000225512 3355 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 TRPC3-201ENST00000264811 3675 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 ACBD5-203ENST00000375901 3685 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 FLT3-201ENST00000241453 3842 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms