Protein–RNA interactions for Protein: Q9BYQ8

KRTAP4-9, Keratin-associated protein 4-9, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-9Q9BYQ8 NEIL1-201ENST00000355059 3759 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 ARHGEF39-201ENST00000378387 3769 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 LEPR-204ENST00000371059 3079 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 C15orf39-201ENST00000360639 4517 ntAPPRIS P2 TSL 2 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 SSU72-202ENST00000359060 4176 ntTSL 2 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 PMS2-206ENST00000441476 2730 ntTSL 5 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 SNORA70.1-201ENST00000363367 141 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 RNU6-478P-201ENST00000363904 110 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 RNU6-324P-201ENST00000363957 106 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 SNORD115-27-201ENST00000364430 82 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 Y_RNA.243-201ENST00000364481 109 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 DCTN3-204ENST00000378913 951 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 Y_RNA.432-201ENST00000384087 111 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 MIR578-201ENST00000384828 96 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 TRBV7-6-201ENST00000390374 392 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 MCF2L-206ENST00000397021 576 ntTSL 2 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 RNA5SP158-201ENST00000410298 102 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AL512353.1-201ENST00000414798 514 ntTSL 3 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 CYCSP5-201ENST00000415043 297 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 GAPDHP64-201ENST00000419696 1003 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 RPSAP59-201ENST00000421048 890 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC245028.1-201ENST00000423259 256 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AL357632.1-201ENST00000426688 643 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC002472.1-201ENST00000450652 563 ntTSL 4 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 RNU7-141P-201ENST00000459304 62 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 RN7SL213P-201ENST00000463482 317 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 RN7SL420P-201ENST00000463843 298 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 RN7SL735P-201ENST00000471015 292 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AL451124.1-201ENST00000478520 1026 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 SNRPCP10-201ENST00000481033 210 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 SRIP1-201ENST00000489235 288 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC233724.8-201ENST00000504574 234 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC233724.3-201ENST00000512613 128 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 RNU6-27P-201ENST00000516146 107 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 RNU6-677P-201ENST00000516914 101 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC069287.2-201ENST00000526963 574 ntTSL 3 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC022880.2-201ENST00000532664 270 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC006927.1-201ENST00000544818 498 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 MIR4694-201ENST00000578534 80 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 PROCA1-209ENST00000581289 766 ntTSL 3 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC087289.3-203ENST00000587556 550 ntAPPRIS P5 TSL 4 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC020905.1-201ENST00000587777 575 ntTSL 4 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 ZNF544-204ENST00000595981 895 ntTSL 3 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC233724.14-201ENST00000603531 331 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC073413.2-201ENST00000604332 360 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC012491.1-201ENST00000605674 799 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 RN7SL726P-201ENST00000605957 299 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AL360181.4-201ENST00000621752 134 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC091304.10-201ENST00000641554 121 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 F11-203ENST00000403665 2396 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 MPP4-212ENST00000620095 2364 ntTSL 5 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC018647.2-201ENST00000605778 4200 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 KCNE1B-203ENST00000622690 3149 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 POLH-202ENST00000372236 3540 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 ALAS1-202ENST00000394965 2430 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 MAX-202ENST00000284165 3155 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 WFIKKN2-201ENST00000311378 3588 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 WARS2-IT1-201ENST00000423984 2060 ntTSL 2 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC018880.1-201ENST00000418898 1319 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 LINC00346-201ENST00000538077 6265 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 CUX1-212ENST00000547394 2878 ntTSL 2 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 DHRS9-208ENST00000602501 2863 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 SERINC3-202ENST00000342374 4445 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 SLC4A9-205ENST00000507527 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC098864.1-202ENST00000507869 2129 ntTSL 2 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 P2RX6-202ENST00000413302 3687 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 RCAN1-203ENST00000381135 2526 ntTSL 2 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 EMG1-202ENST00000599672 4898 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 KIF9-201ENST00000265529 3311 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 SVIP-201ENST00000354193 4541 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 SGPL1-202ENST00000373202 5745 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 SEMA4A-203ENST00000368284 2981 ntTSL 2 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 TFIP11-203ENST00000407431 2974 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 CPEB1-AS1-202ENST00000618020 2994 ntBASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 CFAP44-201ENST00000295868 3377 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 DAZ3-203ENST00000446723 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 DAZ2-209ENST00000449947 3372 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 KDM4C-201ENST00000381306 4601 ntTSL 2 BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 ZNF664-201ENST00000337815 4227 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 PTCH2-201ENST00000372192 4225 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP4-9Q9BYQ8 MX2-201ENST00000330714 3042 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms